| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0157 |
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| Symbol | |
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| ID | 6114380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 191896 |
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| End bp | 192720 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641631638 |
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| Product | competence protein ComF |
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| Protein accession | YP_001758553 |
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| Protein GI | 170724527 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
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| TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGA AAATGAGTGC TGAACTCGAA TCTCTATGGG GCCAGCTTGT GTTTCGTGTC
TCTTCAATGA AATCTGTGTT GATTCGAGAC TGGCCGCTTT CATCTGTCTT TATTAAGAGT
ATACAGTGGG TTTCTGCAAG TTTACCGAAT CGCTGCTTGA TGTGCCATCA AAGCGTCTTA
CTGCCGTCTA GAGGCCTTTG CTCTGCGTGC TTAGACAGTG GGCTGTATCA CCAACCTATC
TGCCAAGGTT GCGGTTGCTC AATGCAGGTT CAAACAAAAT TTTGTGGCCA ATGCACTAAG
AGTCAACCTT TGAGCGTTAT AGCTCCCTGT AGTTATCATC AAGGGTTAGG GCGATGGATT
GGGGCGATGA AATACCAATC TCAATTTGCA GCGCTTCCTA TTTTATCTCA AGCTTTAGTC
TGTCGAGTTC GAGAGATGGA GAGGTTAAGC TTACTGCAAC TTCCTCAGGT TTTGATCCCT
GTGCCGCTAC ACGCTAAGCG ATTAAGAAAG CGAGGTTTTA ATCAGGCTTG GTTGATTGCT
AATGAAATTT ATAAGCAGCT AAATATTCCC ATTGTAACGA ATGCTGTTGA GCGTGTTGTC
GATACAAGAT CCCAAGCTGG ATTGACCGGA AAGCAGAGGC GCCATAATCT CTTATCTGCG
TTTAGGCTTG CCGATGATCT CCCCTATCAG AGAGTCGCTT TAATAGATGA TGTGGTGACA
ACAGGGACGA CGGCTAAGGA GATAGCCAGT TTACTCGAAA AACGGCATAT CCATGTGCAG
GTCTGGTGCT TAGCAAGAGC TGAAGCACCG GGGCTGCTGG ATTGA
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| Protein sequence | MKQKMSAELE SLWGQLVFRV SSMKSVLIRD WPLSSVFIKS IQWVSASLPN RCLMCHQSVL
LPSRGLCSAC LDSGLYHQPI CQGCGCSMQV QTKFCGQCTK SQPLSVIAPC SYHQGLGRWI
GAMKYQSQFA ALPILSQALV CRVREMERLS LLQLPQVLIP VPLHAKRLRK RGFNQAWLIA
NEIYKQLNIP IVTNAVERVV DTRSQAGLTG KQRRHNLLSA FRLADDLPYQ RVALIDDVVT
TGTTAKEIAS LLEKRHIHVQ VWCLARAEAP GLLD
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