Gene Swoo_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0107 
Symbol 
ID6114330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp127970 
End bp128650 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content44% 
IMG OID641631588 
ProductYheO domain-containing protein 
Protein accessionYP_001758503 
Protein GI170724477 
COG category[S] Function unknown 
COG ID[COG2964] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAA CGACAGAACA TACCTACAAA ACGGAATTTA CTTCAAGGGA TCGTGAGTTA 
CTGGAAGGCT ACTTTCGTTT AGCTGACAGC ATGGCTGATC TGATTGGCCC TCACTGTGAA
GTCGTTATTC ACTCTTTAGA GAACTTTGAA CAGTCAGTAG TCAAAATAGT CAATGGACAT
CACACGGGCC GAAAAGAGGG CTCACCCATT ACCGATCTTG GCCTGAAGAT GTTGCGCCTT
TATGAGCAAA CCGGAGAGGT CACCCCTAAA AGTTATTTCA GTAATAACAA GGGGGGTGAG
ATGTTGAAAT CCAGCACCTG TATCCTCGCC GGTGAAGATG GCAAGCCAAT TGGTATGTTT
TGCGTCAACA TGAACCTGTC GCATCCATTT CCGGAGATCA TCAAGACTCT GATGCCTGAT
ACGTCACAGC ATCAAAGTTT CGATATGACA GAGAACTTCA GCGCTTCTGC TGGCGATGTG
GTCGAGCAAG CGTTAACTCA TGCGATATCT GAGGTCGATG CAGATACTAG CGTTAACCTA
AAAGGCCGCA ATAAAGCTAT TACTAAGGTG TTGTTTGATA ACGGCATCTT TGAATTGAAA
GAGGCAACAA ATATTGTTGC TAACCATTTA AGCATTACCA AGCATGCGGT GTACAAGTAC
ATCCGTGAAT TTAAATCCTA A
 
Protein sequence
MIKTTEHTYK TEFTSRDREL LEGYFRLADS MADLIGPHCE VVIHSLENFE QSVVKIVNGH 
HTGRKEGSPI TDLGLKMLRL YEQTGEVTPK SYFSNNKGGE MLKSSTCILA GEDGKPIGMF
CVNMNLSHPF PEIIKTLMPD TSQHQSFDMT ENFSASAGDV VEQALTHAIS EVDADTSVNL
KGRNKAITKV LFDNGIFELK EATNIVANHL SITKHAVYKY IREFKS