Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0074 |
Symbol | |
ID | 6114296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 90750 |
End bp | 91508 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641631554 |
Product | glycosyl transferase family protein |
Protein accession | YP_001758470 |
Protein GI | 170724444 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.221966 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTGC CTATTAGCGT ATTTATCATC ACCAAGAATG AAGAGAAGCA TATTGAGAAA ACACTACAAA GTGTTGCTCT TTTAGATGAG GTGATATTGG TCGACTCAGG AAGTACAGAT GGTACTTTGG CGATAGCCGA GCGTTATGGT GCTAAAATCT ACTCCCACCC TTGGCAGGGT TACGCCAAAC AGAAGCAGTA CGCCATGTCC CTCTGCTCAC ACGAGTGGGT ACTGAACTTA GATGGCGATG AAGCGATAAA CACCAGTTTA ATCGAAGCGT TTAAGACAAT TATGGAACAA GATAAAGCCG ACAGCGTTCG CTTTTGGCGC AACGATATCT TTATCGATAA ACCTCTATCT TCTTGGAGTA AGAAACCTAA TAACCATAGG TTTTATAAGC GCTCAAAGTC TTTCTTTGAT GATTCACGCT TAGCCCATGA AAGCGCAACG GTAGATGGCA AGGAGATCTT TATTAATGAG ACTTTTGATC ACTTTGGCTA CTGCTCAATT GAAGCTATCA CCAGCAAAAA CAACAGTTAT TCAGGCTTAA AAGCCGATGA AAAGTTTGCT AAAGGGAAGA AGTTTTCCAA CTTGAAGTTG ATTACGGTTT TTCCGCTTAT CTTTATCAAA GAGTATTTTA TTCAACGAAA AATATTCTCT GGGAGACGCG GTTTTATCTT AGCCGTTATG GACGCCTATT ACGCCTTTAT CAAAGAGGCC AAGCTGTATG AACACCATCA GTTAAAAGAT AATAAATAG
|
Protein sequence | MKLPISVFII TKNEEKHIEK TLQSVALLDE VILVDSGSTD GTLAIAERYG AKIYSHPWQG YAKQKQYAMS LCSHEWVLNL DGDEAINTSL IEAFKTIMEQ DKADSVRFWR NDIFIDKPLS SWSKKPNNHR FYKRSKSFFD DSRLAHESAT VDGKEIFINE TFDHFGYCSI EAITSKNNSY SGLKADEKFA KGKKFSNLKL ITVFPLIFIK EYFIQRKIFS GRRGFILAVM DAYYAFIKEA KLYEHHQLKD NK
|
| |