Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0071 |
Symbol | |
ID | 6114293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 87624 |
End bp | 88520 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641631551 |
Product | exopolysaccharide biosynthesis protein-like protein |
Protein accession | YP_001758467 |
Protein GI | 170724441 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5039] Exopolysaccharide biosynthesis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.019972 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGAGT TGAAAAGGGT GTTGTTCGAG CTGTCAGCCC AAGAGTTTGT GTTTATTCCT AATCCGGGCA ATGCCGGAGA TTCTTTGATC AATGCTGCTA GTTTTCAGTT TCTAGATGAC ATGAAACTTA ACTACAAGGT TATATCTCCT CGAGAGATTA AACAGACTTT GAAAAAAGGG CGCTCGATTG TAGATAAGTT TAACCTTAAG GATAAAGTCA TTGTGCTTGG CGGTGGTGGT GGATTTACTG AACATTACCC CTACTCCAAT GCCTTAGTTA GCGCTCTTGA TAAGCAAGTT AAGCAGCTTA TTTTGCTCCC TTGTACCATA GAGGGCTATC AGGAAACCTT GAGTGGGCTT AGCGATCGTG TAACTGTATT TTGCCGTGAG AAGGTGAGTT TCGAGTATCT CAATCGCGTC TGTAATGGGC CGACAATATA CCTGAGTCAT GACATGGTAT TTGCTGCTGA CTTTACACGT ATTATGGCGG TAACATCCTC TCTTTCATCT ATTCGAAATC GTATTAAAGC CGCTAAGAGC CGTGCTCAAG TTGCTGATTA TATTAAGCGT AATGGCATAG TTAAATTGAA TGCTTTACGG TTAGATGAGG AGCGCAGTGA TATCGAAGTG CCAACTGAGA ATATGGATAT GTCGGCACTA TTTTCGTTGG GGACAAAAAC CAAAGCCACA AATTTCTATG CTGCTCAGGA GTTTTTGTCA CACTTAGATA AGTTTGAGCA GGTTGTGACC AACCGATTGC ATGTGTGTAT CGCGTCAACC CTGTTAGGTA AGCAAGTTAC CTTCCTTGAT AACTCCTATT TTAAAAATCG TGCCGTGTTT GATCGCTCAA TGGGTAAGTT CAACAATGTT AAGCTAGTGA GTGAGTTACC AAGCTAG
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Protein sequence | MQELKRVLFE LSAQEFVFIP NPGNAGDSLI NAASFQFLDD MKLNYKVISP REIKQTLKKG RSIVDKFNLK DKVIVLGGGG GFTEHYPYSN ALVSALDKQV KQLILLPCTI EGYQETLSGL SDRVTVFCRE KVSFEYLNRV CNGPTIYLSH DMVFAADFTR IMAVTSSLSS IRNRIKAAKS RAQVADYIKR NGIVKLNALR LDEERSDIEV PTENMDMSAL FSLGTKTKAT NFYAAQEFLS HLDKFEQVVT NRLHVCIAST LLGKQVTFLD NSYFKNRAVF DRSMGKFNNV KLVSELPS
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