Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0070 |
Symbol | |
ID | 6114292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 86534 |
End bp | 87577 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641631550 |
Product | glycosyl transferase family protein |
Protein accession | YP_001758466 |
Protein GI | 170724440 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00130455 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCCTAA ACTTAAATAG CATTACCTCT TTGTGTTTAC TTCGCCTCTC AGCAATTGGC GATGTGTGCC ATGCCGTAGC TATGGTGCAA GCGATACAGA AGCAATACCC CAACCTCAAG ATCACTTGGG TGATAGGTAA AGTTGAATAT CAGCTTCTTA AGCACTTGCC TGGCGTGGAG TTTGTTATTT TCGATAAGTC TCAGGGGTGG AGAAGTTACT TTAATTTGAG AAAAGCGCTG GCAGGACAGA GGTTTGATGT TTTGCTGCAT ATGCAAGTTG CGCTGCGAGC AACGATTGCA TCATTGGCTA TCTCGGCTAA AACCCGTATT GGCTTCGATC GTGCCCGCGC AAAAGAGGGG CAGTGGTTAG TCACAAACCA TAGAGTGGAT GCGATAGCCT CTCCCCATGT GCTTGAGGGC TTTATGGGGT TTGCTAAAAC CCTAGGAGTG ACAGAGTTAA CGCCACAGTG GAATATTCCT GTCCCAGAGG CTGATACTGA GTTTGCTAAG CTGTTACTAC CCGATGGAGA GAGGAGTTTA GTGATCTGTG CGGCTGCCAG TAAAGCTGAG CGTAACTGGT TACCTGAGCG CTATGCAGCT GTCGCTGAAC ATGCCATTGC TAAAGGTTAC CGAGTGATCC TGTGTGGTGG ACCTACTGAG TTAGAGCAAA CTTTGGCGCA ACAGATTGTG AGTCACAGCT CGCGGCCACT GGAAAATCAA GTGGGTAAGA CCACACTGAC TCAGCTACTG GCGGTATTAA AGCAAGCTTC AATCGTATTA GCACCTGATA CAGGACCTGC TCATATGGCG GTTACACAGG GTACGCCAGT TATCGGGCTA TATGCCCACT CCAATCCTGG GCGTACAGGG CCTTATATGA GTCTTGAACA TGTGGTGAGC GTTTATGACA AGGCGATAGC GAGTCAACAT AGTCAGCCAG TTGTTTGGGG AACACGAGCC AAAGGTGAAC ACCTTATGGA GATGATTGAG GTCGCTCCTG TACTGTCTGT GTTTGATGAT TTAGCCCGTG AGTTTGATAA GTAA
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Protein sequence | MSLNLNSITS LCLLRLSAIG DVCHAVAMVQ AIQKQYPNLK ITWVIGKVEY QLLKHLPGVE FVIFDKSQGW RSYFNLRKAL AGQRFDVLLH MQVALRATIA SLAISAKTRI GFDRARAKEG QWLVTNHRVD AIASPHVLEG FMGFAKTLGV TELTPQWNIP VPEADTEFAK LLLPDGERSL VICAAASKAE RNWLPERYAA VAEHAIAKGY RVILCGGPTE LEQTLAQQIV SHSSRPLENQ VGKTTLTQLL AVLKQASIVL APDTGPAHMA VTQGTPVIGL YAHSNPGRTG PYMSLEHVVS VYDKAIASQH SQPVVWGTRA KGEHLMEMIE VAPVLSVFDD LAREFDK
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