Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0058 |
Symbol | engB |
ID | 6114279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 69541 |
End bp | 70200 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641631537 |
Product | ribosome biogenesis GTP-binding protein YsxC |
Protein accession | YP_001758454 |
Protein GI | 170724428 |
COG category | [R] General function prediction only |
COG ID | [COG0218] Predicted GTPase |
TIGRFAM ID | [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00136199 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATTTTC GTAAAGCAAA GTTTTTAATC AGTGCTCCTG ATATTGCGCA TCTTAACCAG TATTTACCGG GAGATGCAGG GGTTGAGATC GCGTTTGCGG GTCGTTCAAA TGCCGGTAAA TCGAGTGCAT TGAATATGCT AACCGACCAA AAAGGGTTAG CAAGAACCAG TAAAACCCCA GGAAGAACAC AATTAATTAA TGTGTTTGAG TTAGATGAAC ACCGCCGATT GGTGGATCTG CCTGGTTATG GTTTTGCTCA AGTTCCTTTG GCGCTGAAGA AAAAGTGGCA GTACGCCCTA GGTGAATACC TGCAAGAGCG CCAATGTTTA ACTGGCGTTG TGGTTTTGAT GGATATTAGA CACCCTCTTA AAGATCTCGA TATGCAGATG ATTGAGTGGG CAGTTGAAAG CGAGATCCCT GTACTTGCTC TGTTAACCAA AGCGGACAAG ATGAAGCAGA GTGAGCGGAT GAAGATGATT AACGAGGTGA GAAAACACCT TGGTGATTAT GATGACCGAG TCAAAGTTGA AGCATTTTCA TCGCTAAAAG GCTTAGGTAA GCCTAAAGTG CTGAGTATTT TGAATGAGTG GTGTCATCCT GAATGGTTAA TGGAAGCGAT AGCCGAAGCT GAAGCCGCTG ATGAGAGCGA AAATGATTAA
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Protein sequence | MDFRKAKFLI SAPDIAHLNQ YLPGDAGVEI AFAGRSNAGK SSALNMLTDQ KGLARTSKTP GRTQLINVFE LDEHRRLVDL PGYGFAQVPL ALKKKWQYAL GEYLQERQCL TGVVVLMDIR HPLKDLDMQM IEWAVESEIP VLALLTKADK MKQSERMKMI NEVRKHLGDY DDRVKVEAFS SLKGLGKPKV LSILNEWCHP EWLMEAIAEA EAADESEND
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