Gene Swoo_0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0058 
SymbolengB 
ID6114279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp69541 
End bp70200 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content44% 
IMG OID641631537 
Productribosome biogenesis GTP-binding protein YsxC 
Protein accessionYP_001758454 
Protein GI170724428 
COG category[R] General function prediction only 
COG ID[COG0218] Predicted GTPase 
TIGRFAM ID[TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00136199 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATTTTC GTAAAGCAAA GTTTTTAATC AGTGCTCCTG ATATTGCGCA TCTTAACCAG 
TATTTACCGG GAGATGCAGG GGTTGAGATC GCGTTTGCGG GTCGTTCAAA TGCCGGTAAA
TCGAGTGCAT TGAATATGCT AACCGACCAA AAAGGGTTAG CAAGAACCAG TAAAACCCCA
GGAAGAACAC AATTAATTAA TGTGTTTGAG TTAGATGAAC ACCGCCGATT GGTGGATCTG
CCTGGTTATG GTTTTGCTCA AGTTCCTTTG GCGCTGAAGA AAAAGTGGCA GTACGCCCTA
GGTGAATACC TGCAAGAGCG CCAATGTTTA ACTGGCGTTG TGGTTTTGAT GGATATTAGA
CACCCTCTTA AAGATCTCGA TATGCAGATG ATTGAGTGGG CAGTTGAAAG CGAGATCCCT
GTACTTGCTC TGTTAACCAA AGCGGACAAG ATGAAGCAGA GTGAGCGGAT GAAGATGATT
AACGAGGTGA GAAAACACCT TGGTGATTAT GATGACCGAG TCAAAGTTGA AGCATTTTCA
TCGCTAAAAG GCTTAGGTAA GCCTAAAGTG CTGAGTATTT TGAATGAGTG GTGTCATCCT
GAATGGTTAA TGGAAGCGAT AGCCGAAGCT GAAGCCGCTG ATGAGAGCGA AAATGATTAA
 
Protein sequence
MDFRKAKFLI SAPDIAHLNQ YLPGDAGVEI AFAGRSNAGK SSALNMLTDQ KGLARTSKTP 
GRTQLINVFE LDEHRRLVDL PGYGFAQVPL ALKKKWQYAL GEYLQERQCL TGVVVLMDIR
HPLKDLDMQM IEWAVESEIP VLALLTKADK MKQSERMKMI NEVRKHLGDY DDRVKVEAFS
SLKGLGKPKV LSILNEWCHP EWLMEAIAEA EAADESEND