| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0044 |
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| Symbol | |
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| ID | 6114261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 48724 |
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| End bp | 49281 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641631519 |
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| Product | Sua5/YciO/YrdC/YwlC family protein |
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| Protein accession | YP_001758440 |
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| Protein GI | 170724414 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.268227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.36574 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAGAGC AGGCTCCTGC TGAAGTTAAA CAGGTGATAG AGAGTGGTGG GGTGGTTGCG
TACCCGACAG AGGCGGTTTA TGGCCTAGGT TGCGATCCCG ATAATGATGC TGCTATTACT
AAATTGTTGG CGATAAAGAA GCGGCCTTGG GAGAAGGGAT TGATTTTGGT TGCAAGCGAT
TATCAGCAAC TGCTTCCCTA TATCGATGAT TCACAACTGA CCGAAGAACA GCGTGAGCGG
GTATTCAGTA AATGGCCCGG TCCGTTTACC TTTATCATGC CGATTAAACC TGGCATCTCT
AATTTGTTAT GTGGCAGTTT TAATTCACTC GCAGTAAGAG TTTCCGACCA CCCGACAATT
CAAGCGATAT GTCAGCAGCT TGGAAAGCCA TTAGTCTCTA CCAGTGCCAA TCATTCAGGT
GAAGAACCAG CAATGAGCCA TGAAGAGATC CTTGCCAAAT TTGAAGGGGA GATAGACGCT
TTAGTGGCAG GTAGCTTAGG GGAACAAAGA AAGCCTTCTA CTATCATAGA TGCCATCAGC
GGCAAGATAT TACGTTAG
|
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| Protein sequence | MLEQAPAEVK QVIESGGVVA YPTEAVYGLG CDPDNDAAIT KLLAIKKRPW EKGLILVASD
YQQLLPYIDD SQLTEEQRER VFSKWPGPFT FIMPIKPGIS NLLCGSFNSL AVRVSDHPTI
QAICQQLGKP LVSTSANHSG EEPAMSHEEI LAKFEGEIDA LVAGSLGEQR KPSTIIDAIS
GKILR
|
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