| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0024 |
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| Symbol | |
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| ID | 6114241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 30877 |
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| End bp | 32334 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641631499 |
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| Product | TrkH family potassium uptake protein |
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| Protein accession | YP_001758420 |
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| Protein GI | 170724394 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.981015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0103181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATATA GAACAATAAT AAGAATCACT GGATTCTTAA TGGGACTCTT CTCCCTGTCA
CTGCTTCCTC CAGCCTTGGT TGCGGTGATC TACAAAGATG GTGGTGGTAC CGCTTTTATC
CAGGCTTTTT TTCTCAGTCT CTTTTTAGGC TTCCTGCTCT GGTACCCTAA TCGGAGGCAT
AAAAAAGATC TTCGAACCCG TGAGGGCTTC TTGCTGGTTG TATTGTTTTG GGCCGTACTG
GGATCTATCG GTGCCGTGCC ATTCATCTTC ACTAATCAAC CAGATCTGAG CATAACCGAC
AGTTTTTTTG AATCCTTCTC TGCACTCACG ACTACAGGGG CAACTGTGAT TGTTGGCTTG
GATTCTCTTC CAAAAGCTAT TCTCTTCTAT CGACATCTGC TGCAGTGGCT CGGTGGCATG
GGGATCATTG TACTCGCTGT GGCCATTTTG CCTATGTTAG GTATTGGGGG GATGCAGTTA
TATCGGGCGG AGATGCCCGG ACCTGTAAAA GATAGCAAAA TGACCCCACG TATTGCCGAA
ACCGCTAAGG CGCTTTGGTA TATCTATTTT GCACTGACTA TCGCCTGCGC CGTGGCTTAC
TGGCTGGCTG GAATGGATGT GTTTGACGCC ATCTGTCACT CATTCTCAAC CATAGCAATA
GGCGGTTTCT CGACCCATGA TGCCAGTATG GGTTACTTTG ATAGCACTGC GATAAACATG
GTTTGTGTGG TGTTTTTATT GATCGCAGCG CTCAATTTTA GTTTGCACTT CGCCGCGTTT
ACTCGGCGGG GAATCAATCT AAAGATCTAC TTTAAAGATG CGGAATTTAA AGCCTTAGTG
ATAGTGCAGT TGGTGCTCAC GGGGATCTGT TTTGGTGTGC TATACCACTC GGGGATCTAT
GACTCCCCCG AACAGACATT AGATTTCGCC CTGTTTCAGG CGGTATCTAT CTCGACGACG
GCAGGTTTCG GTACCGAGAG CTTCCATATG TGGCCACTGT TTCTTCCTAT GCTACTCATC
TTCTCCAGCT TTATCGGTGG CTGTGGCGGC TCTACCGCTG GTGGCATCAA GGTGATACGT
ATGATCTTGC TGTTAAAGCA GGGCTCAAGA GAGCTAAAAC GTCTTGTCCA CCCCAGAGGC
ATGTTCTCAA TTCGTATCGG TGATAAGGCC CTGCCTGATA GAATTATCGA TGCTGTGTGG
GGCTTCTTCT CTGCTTATGC TTTGGTATTT GTGCTCTGTA TGCTGCTATT GATGGCGATG
GGAATGGATA ACATCACTGC GTTTAGTGCC ACCGCTGCTT GTCTTAATAA CCTAGGTCCA
GGGCTTGGTG AAGTGGCGAG TAATTACGCC AGTATTGGTG ACGGTGAGAA GTGGGTGTTG
TTAATGGCCA TGCTGTTTGG TCGACTTGAG GTATTCACCT TGCTCGTGCT GTTTACCCCG
ACATTCTGGA AAAACTAG
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| Protein sequence | MQYRTIIRIT GFLMGLFSLS LLPPALVAVI YKDGGGTAFI QAFFLSLFLG FLLWYPNRRH
KKDLRTREGF LLVVLFWAVL GSIGAVPFIF TNQPDLSITD SFFESFSALT TTGATVIVGL
DSLPKAILFY RHLLQWLGGM GIIVLAVAIL PMLGIGGMQL YRAEMPGPVK DSKMTPRIAE
TAKALWYIYF ALTIACAVAY WLAGMDVFDA ICHSFSTIAI GGFSTHDASM GYFDSTAINM
VCVVFLLIAA LNFSLHFAAF TRRGINLKIY FKDAEFKALV IVQLVLTGIC FGVLYHSGIY
DSPEQTLDFA LFQAVSISTT AGFGTESFHM WPLFLPMLLI FSSFIGGCGG STAGGIKVIR
MILLLKQGSR ELKRLVHPRG MFSIRIGDKA LPDRIIDAVW GFFSAYALVF VLCMLLLMAM
GMDNITAFSA TAACLNNLGP GLGEVASNYA SIGDGEKWVL LMAMLFGRLE VFTLLVLFTP
TFWKN
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