Gene Swoo_0014 details

Gene Information

• Locus tag: Swoo_0014
• ID: 6114231
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella woodyi ATCC 51908
• Kingdom: Bacteria
• Replicon accession: NC_010506
• Strand: +
• Start bp: 18724
• End bp: 19308
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 641631489
• Product: DNA-3-methyladenine glycosylase I
• Protein accession: YP_001758410
• Protein GI: 170724384
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2818] 3-methyladenine DNA glycosylase
• TIGRFAM ID: [TIGR00624] DNA-3-methyladenine glycosylase I

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 5
• Fosmid unclonability p-value: 0.000247076
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGAAAAGC AACGTTGTAG CTGGGTTGGG GCTGATGATC TATATCAAGC CTATCATGAT 
GAGGTGTGGG GAAGGCCTGT TTTTGATAGC CAAGAGCTGT TTGCTAAGCT CTGTCTCGAC 
GGTCAACAGG CAGGTTTATC TTGGATCACT ATCCTTAAAA AGCAGCATAA TTATGAAGCC 
GCTTTCGCTA ATTTTGATCC TGCCATCATC GCTAAGTTTG ATGATGACAA AGTTGAGGAG 
TTACTGCTTA ATAAAGGGAT TGTGCGTAAC CGATTAAAGG TTAACTCGAT CATCAAAAAT 
GCTCGTGCTT ATATGACTCA TTTTTCTGAC ACCCAGGGTG ATGATTTCTC TAGGTTTATT 
TGGAGTTTTG TCGGGGGGAA GCCCATAGTT AACAAGTTTA ACTCTATGTC AGAAGTGCCT 
GCTCAAACCC CTGAGTCAGA AGCTATGTCT AAAGCTCTGA AAAAACTAGG TTTTAATTTT 
GTTGGACCAA CTATCTGTTA TGCCTTTATG CAAGCTGTGG GCCTGGTGAA CGATCATACA 
ACAGATTGTT TTTATTATGA TTTAAGCGAA AAGAGGAAAA GCTAA 

 

Protein sequence

MEKQRCSWVG ADDLYQAYHD EVWGRPVFDS QELFAKLCLD GQQAGLSWIT ILKKQHNYEA 
AFANFDPAII AKFDDDKVEE LLLNKGIVRN RLKVNSIIKN ARAYMTHFSD TQGDDFSRFI 
WSFVGGKPIV NKFNSMSEVP AQTPESEAMS KALKKLGFNF VGPTICYAFM QAVGLVNDHT 
TDCFYYDLSE KRKS