| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0002 |
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| Symbol | |
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| ID | 6114219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1805 |
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| End bp | 2905 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641631477 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_001758398 |
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| Protein GI | 170724372 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000136085 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000917615 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAATTTT CAATTGATAG GGACGCCCTA TTAAAGCCGT TGCAACTCGT TACAGGCGCG
GTGGAGAGAC GACATAACTT ACCCATCCTG GCAAACCTTT TAGTAGAAGT GAGTGGTCAC
TCACTTAAGA TGACCGGAAC CGATTTAGAA GTTGAATTGG TTGGCCAGGT TCAGCTCGAA
GGCGAGGTCC AAGAGGGACG CACCACGATT CCGGCGAAGA AATTCCTCGA TATTGTTAAA
TCATTACCCG ATCAAGTTGA GCTTAAAATT GAGCAACAGG AAAATCGCCT GTTACTCCGC
TCTGGTCGTA GTCGCTTTAC CTTAGCCACG CTTCCGGCGG AAGAGTATCC CAATGTTGAG
GCATTCCAGG CTGAGATTGA GTTTACAATT AATCAGGGCA CATTGAAGTC GCTGATCGAT
GCCACTCAAT TCTCTATGGC TAACCAAGAT GTTCGCTATT ACCTTAATGG CTTGTTGCTT
GAGACTGAGG GCAATGTGCT GCGTGCCATT GCGACCGACG GTCACCGCTT GGCGTTAAGT
CACAGACAGA TACAAGATAC CTTGCCTGAA AAGCAGGTTA TCGTTCCTCG TAAAGGTGTT
GTTGAGCTTC AGCGTCTTTT TGAAGGTGAA GAGTTGGATA TCACTATTGC GATTGGTGAC
AACGCAATTA GAGCGACGAC AGCAAGCGCT GTGTTTACCA GTAAGCTGGT TGATGGCCGT
TTCCCTGATT ATCGTCGAGT TCTGCCTAAG GGCGGCGATA AGGTCGTGAT TGCGAGCCGT
AATCATCTAA AACAAGCACT ACTTCGTGCC TCGATTCTGT CGAATGAGAA GTTCCGTGGT
GTGCGTGTTC AGCTTGAAGA GAACTTAATT AAGATCACTG CCAATAACCC TGAACAGGAG
GAGGCGGAGG AGATCTTAGA TGTGGAGTAT GAGAATACAC CGCTTGAGAT TGGCTTTAAT
GTGAGTTACC TGCTTGATGT GCTCAATAAC CTACCCTCGG ATGATGTGCG TATCACCTTA
ATTGATGGCA ACTCTAGTGC CTTGATTGAG AATCACATCG AAGAGGACTC TATGTATGTT
GTGATGCCGA TGCGTCTGTA G
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| Protein sequence | MKFSIDRDAL LKPLQLVTGA VERRHNLPIL ANLLVEVSGH SLKMTGTDLE VELVGQVQLE
GEVQEGRTTI PAKKFLDIVK SLPDQVELKI EQQENRLLLR SGRSRFTLAT LPAEEYPNVE
AFQAEIEFTI NQGTLKSLID ATQFSMANQD VRYYLNGLLL ETEGNVLRAI ATDGHRLALS
HRQIQDTLPE KQVIVPRKGV VELQRLFEGE ELDITIAIGD NAIRATTASA VFTSKLVDGR
FPDYRRVLPK GGDKVVIASR NHLKQALLRA SILSNEKFRG VRVQLEENLI KITANNPEQE
EAEEILDVEY ENTPLEIGFN VSYLLDVLNN LPSDDVRITL IDGNSSALIE NHIEEDSMYV
VMPMRL
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