| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2534 |
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| Symbol | |
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| ID | 4282467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 2892248 |
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| End bp | 2894260 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638139419 |
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| Product | putative ATP-dependent protease La |
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| Protein accession | YP_755193 |
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| Protein GI | 114568039 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease
[TIGR02903] ATP-dependent protease, Lon family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000500974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGCAGT ATTCAGTCGC AACAGAATTT AGCCAGGAAA CGGAGCAAAG CCAGGAAACC
CAATTATACT GGAAGATAGA ATGCTTATAT AAGAACCTGG GGCTCATTTA CGGTACCCAG
GGACTCATAC TGAGGGCCAG CAAGCTGGAT GCTATCGATT TGATGGGCTC GCCAAAGCTG
GAGGAAAGAA TATTAGCCTT GCAGAGAATC CTGCAAGAAG ACCCTACCAT AAATGAAGTG
GACCCCCCGG GCAACCTGGG CCTGGCCCTG GATCGTTTGG AGGAAAAGGT GGCGGAGGTT
TTCGCTCGGA AAAGCATAGA AGAGCAGATT CAACAGCGCA TTCAGGAAAA GATGGATGAA
AAATACAGCG AATATATCCG AGATTTGAAA TTAGAGGTTT TAAAGGAACA AAGCAGCAGC
CCGGAGAATG CTCAAACCCT AAAAAAATTG GGCAGGCTGG AGAAAATGGA GCACACTAAT
CTCAGTCGCT CGGCTCTGGA AATTCTCCGG CCATCCTGCC GGGAGGATAT AATTGGGCAG
GGGAAAGCCC TCAGCTCCAT AATATCCAAG TTAAACAATC CTTACCCCCA GCATATCCTG
CTCTATGGCC CTCCCGGGGT GGGCAAAACC AGCTGTGCCC GCCTGGCTCT GGAGATGGTC
AAAGGACGGA AAGGGAATCC ATTTAAAGAA GATGCCCCCT TTATCGAAGT GGATGGAACC
ACCCTGCGCT GGGACCCGCG CGAATCCACC AACCCCCTAC TGGGATCAGT ACATGACCCC
ATATACCAGG GAGCAAAAAG AGAATTGGCG GAGGAAGGCA TACCAGAACC CAAGCTGGGG
CTGGTGTCTG ATGCCCATGG CGGTATTCTC TTTATTGATG AATTGGGGGA AATGGATCCA
TTGCTGCAAA ACAAACTATT GAAAGTCCTG GAAGATAAGC GGGTATTTTT TGAATCCTCC
TATTATGACC CCCATAATGA GAGGATTCCC CAGTATATAA AACAGCTTTT TGAAAAAGGG
GTGCCGGCAG ATTTCATATT GATAGGAGCT ACCACCAAAA GCAAGGAAGA AATCAACCCG
GCTTTCCGAT CACGCTGTAT GGAAGTTTTT TTTGAACCGC TCAGAGCGGA TCATATTCGC
CAGATGGTAG TAAACTCGGC AAAAAAACTT AATATAAACA TGGAAGATGG GGTAGCCGAG
ATTATTGCTG AATATACCGC AGAAGGGCGT GGGGCTAATA AGATACTGGT TGATGCCTAT
GCCCTGGCAG TAAACGAAAG CTGTGGAGAA GAAGCCCCGC TGGAAGTCCG CTGCCAGCAT
ATATACCAGG CCATTCGCAA CAGCCGCATC ACCCCCCAGA TACTAAACCG GGCCTCTGAC
AGCAGCGAAG TTGGCAAGAT CTTTGGCGTA GGGGTTTCTG GCTACCAGGC CAGCTTGATT
GAACTGGAGG CTATAGCCTT CCCGGCTGAG GAACAAGGGA AAGGCAATAT TCGTTTCAAT
GACACTGCTG GTTCCATGGC CCGGGATTCC CTTTTTAATG CCACTTCTTT GTTTAGAAAA
GAAACCGGGG AAAACTTGAA GAATTATGAC CTGCATATAA ACATAGTGGG CGGAGGCAAT
GTGGACGGGC CTTCAGCCGG AGCCGCCATT TACCTGGCCA TATTGAGTGC GATAAAAGGC
ATGGCTCTGC GTCAGGATCT AGCCATTACC GGTGAAGTAT CCATACAGGG ACGTGTAAAA
GCCGTGGGGG GGATTTACGA AAAAATATAC GGAGCCCGCC AGGCCGGTAT AAAAAAGCTG
CTCATTCCCC GGGACAACCT GAAGGATGTT CCTGAGGATA TAAAAGGTTT GAAGATTGTA
CCCATTAGTT ACATAAAGGA AGCATACCCC CATGTTTTTA GCCCAGGCCA GGTAGAATCC
GGCGGCGAAT TACCCATATA TAAAGAGGTG AGATATGTCC CCCGCTTCTT GAGCGGCCGG
GTTCCTATTA ACAAAACAGG CGGCGGGTTC TAA
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| Protein sequence | MKQYSVATEF SQETEQSQET QLYWKIECLY KNLGLIYGTQ GLILRASKLD AIDLMGSPKL
EERILALQRI LQEDPTINEV DPPGNLGLAL DRLEEKVAEV FARKSIEEQI QQRIQEKMDE
KYSEYIRDLK LEVLKEQSSS PENAQTLKKL GRLEKMEHTN LSRSALEILR PSCREDIIGQ
GKALSSIISK LNNPYPQHIL LYGPPGVGKT SCARLALEMV KGRKGNPFKE DAPFIEVDGT
TLRWDPREST NPLLGSVHDP IYQGAKRELA EEGIPEPKLG LVSDAHGGIL FIDELGEMDP
LLQNKLLKVL EDKRVFFESS YYDPHNERIP QYIKQLFEKG VPADFILIGA TTKSKEEINP
AFRSRCMEVF FEPLRADHIR QMVVNSAKKL NINMEDGVAE IIAEYTAEGR GANKILVDAY
ALAVNESCGE EAPLEVRCQH IYQAIRNSRI TPQILNRASD SSEVGKIFGV GVSGYQASLI
ELEAIAFPAE EQGKGNIRFN DTAGSMARDS LFNATSLFRK ETGENLKNYD LHINIVGGGN
VDGPSAGAAI YLAILSAIKG MALRQDLAIT GEVSIQGRVK AVGGIYEKIY GARQAGIKKL
LIPRDNLKDV PEDIKGLKIV PISYIKEAYP HVFSPGQVES GGELPIYKEV RYVPRFLSGR
VPINKTGGGF
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