| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2500 |
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| Symbol | |
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| ID | 4282567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 2842854 |
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| End bp | 2846909 |
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| Gene Length | 4056 bp |
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| Protein Length | 1351 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638139385 |
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| Product | leucine-rich repeat-containing protein |
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| Protein accession | YP_755160 |
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| Protein GI | 114568006 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGG GTTTTTGTCA CAATTCAAAA TTATTAATTT CAATCGTATT GGCTGTATCA
TTATTAATGA CATCAGTACC TGATGCCTTT GCTGCAACGA TAAATACTGC CTCAATATCC
GGTGTTGTTA CTGGTCAGGG CGGTACTCCA CTTCCTGGAA TATTAGTGCT GTTATACAAA
AACTATGAAC GTATTTCAAC CGCCAATACT GATACAAATG GCCAGTATTC TTTTGGCGAC
CTTAGCTCTG GTTCATACAG AATGTTGTTC AGTCCGACTT CATATAATCA AAAAAATGGA
ACAACATATG CTTACCAGCG TTCTCCATAT AGTTCCACGA GTTTATCGAG TCCGATTACA
CTTAGCGACG GGCAGTCGTT ATCCATTAAC ACTCAATTAG AGAACGCCGG TTTTATTTCG
GGCAAAGTAT ATGATCCAGA CGGCAAACCG TTAACCGGAA TAATGGTATG TGAAGTATAT
GAAGGCAGTA CATATGGGAG GAATTATACA AATACAAGCG GAGAATATAT TATAACCCAA
CTTCCGGCGG AGAATTACAA AGTACACTTT GATCCGGCAG AACACAATGC CCAATACGGC
ACTGATTATT TGGAACAGTG GTATAACAAT AAGCCTGGTT CTAACCTTGC CGATGAAGTA
GCAGTTATCC AAGGACAAAC TATAAATGCG GACGCTTACC TTCAAATCTC CTCCGGTACG
GTTTCGGGAC TTAAGGCAAA GGCATGCGGC AACCAAATCA GTTTAAGCTG GTCAGCCTTT
CCCGGAGCGC AGAGTTACAG CATTTATCGT ACCTCCCGCT TTTTCGGAAT TAACTACCAG
AAAATAGATG CTACAACATC CTCTTCCTAC ACGGATAGCA ATTTGCCTCT ATCTACTGAC
TATTGGTACA AGGTAAAGCC GGTAACGGCC ATAGGTGAGG GGAGTTTTTC AGCACCGGTC
CGTACCAAGA CGGGTGATAC TATTATCACT GATCCGGGGG TAATAATAAG CACCGTAGCT
GGAAATGGCA CTGCGGGGTA TTCAGGAGAT GGCGGGCCCG CCACCTCTGC CCAATTAAAT
ACCCCCCGGG GAGTGGTATG TGATGGTGCT GACAATTTGT ACATTGTAGA CGGTGACAAC
CAGCGTATAC GTAAGGTCGA CACATCCGGG AAGATAAGCA CCGTAGCTGG AAATGGTACC
CACTGGTTTG AAGGAGATGG GGGACCCGCA ACCGCTGCCG GATTATACGA TCCTATAGGA
GTAGCATGTG ACAGTAGTGG GAATTTGTAT ATTGCAGAAA GTAACAGTAA CTGCATACGC
AAGGTGGACA GCTCCGGGAA GATAAGCGTT GTAGCTGGAA TTGTTACACA AGGGTGGGCT
ACGTATGAAG GAGATGGAGG CCTCGCAACT TCAGCCAGAC TGAATTATCC TTTTGGTGTA
GCATGTGATG GTAGCGGGAA TTTGTATATT GCAGATCGCG GCAATCACCG CATACGAAAG
GTGGATACTT CCGGTATAAT AAGCACCGTA GCTGGAAATG GCACTGCGGG GTATTCAGGA
GATGGCGGGC CCGCCACCTC CGCCCAATTA AAGGATCCTG TTGGGGTAGC ATGTGATAAA
AATGGTAATT TGTACATTGT AGATAAAGAT AACAATCGCA TACGCAAGGT AGACAATACC
GGGAAGATAA GCACTGTAGC TGGAAATGGT ACTGGTGGAT ATGCAGGGGA TGGGAGCCCC
GCAACCTCTG CTCAAATATG GGTTCCTTAT GGAGTTACTT TTGACAACAA TGGTAATATG
TACATTGCAG ATATGAATAA CAAGCGTATC CGTAAAGTAG ACCCTTCGGG GATAATCACC
ACGGTAGCCG GAAATGGAAG CTGGAAGTAT TCCGGAGACG GAGGACCTGC AGAAGCTGCC
GGATTATGTA ATGCTGTTGG GGTGGCGTGT GATAGCAGCG GTAATTTGTA TATAGCAGAT
AGTCATAGCA ACTGCATCCG TAAGGTGGTT TTAGGTACAA CACCAAACAA TACTATCACT
TTCCCCGACC CCAACCTGGA AGCGGCCATC AGAGAAACAC TCGACAAACC GACTGAAGAC
ATTCTAAATA CTGACATAGA AAATATTACA GAACTGGCAT TAAACTTCAA GGGCCTAGCT
TCCCTGGAAG GGATACAACA CTTTACCAGC CTACAAACGC TATACTTGGC CGGGAATGGC
ATAACAGATC TTACTCCATT GCAGTCACTC CGCAACCTGC AGTACTTGGA TATTTCCAAT
AATGCTATAA CTGACCTGGG CCCCTTGACT AAACTCAGCA ATTTGCAGGG CCTGGATTTT
TCGTACAACC AGCTAACCGA TATTCAGGCA TTGGCCAACC TTACCGACTT ACGCTATCTT
GATTTTTCTT ACAATGATGG GGTGGGTGTG TTGGAGCCAC TGCGCAACCT GATCGGCTTA
ACCGATTTGT TTATAGCCGG CATCAGAGAT TCAAACCCCG CCCAAGTTGC CCTCTGCAGC
GTCTCTAGCA ACCAAAGCAC TGATATTGGA GCAATACTGG CCGGTCTTAA GAACTTGGAG
AACCTGGACA TATCCAATAA TGAGCTGCCC GATATCACCT TCGTCAACCA GCTGCCGAAT
TTAAAAACCA TCGATGCATC GAACAATACC ATAGTCGATA CCACACCGCT GGAAACCCTG
TCTAACCTCG AGAAAGTGAG CCTGTATAAT AATAACATCA CCAGCATCAG TTCTCTAGTC
AAGATACCTT CATTACAGGA AATCAACATC TCTGGCAACC AGGTCGGGGG TATCAGTCAA
ATTGAACAGT TAGCTAATCT AACTAAACTG GACCTGACCG CCAACCCTAT ATCCGACCTG
ACTCCTTTGA CCCTTTTACA GGATACCGTA GAAGTAAACC ATGAAGAATT CACCGAGCCC
TACACTTCTT GGGAGGAAAG AACCGACATA CCTATAAACA GAACCTGGAA AATAGAATTC
AGCCATGCGG TCGATACAAG CACCGTTAAC CCGGATACCA TTGTGGTGAA AGAGCAAAAT
AACCAACCGG TTACCGTTAA TATAAGCAGA GGAGATACTG ACAACACAGT ATTGCTCGAA
CCACCCGCCG GTGGATACAA GGCAGGTCAA TGCTACTACC TCTTTATCAA AAAAGGCATT
GGTTCAAGCG ATGGCAAAGT TTTACAAAAC AACATCAGGA TGAAATTCAC TATAGCAGGC
ACTGACAGTC CCGCTGGTCA TAAACTCCAG TCATTGCCAA TAGTGATCCA ACTGGTTGGA
GGGGTACTGA CCCTGAGGGA CTTCTGTATT TTCACCAATA ACATATTAAA AATTTGTGAC
CAAAACAAGT TTATCGAACA TTTCATTCAC AAAACCAACT TTACAGATGA TCTCCCGCTG
GCCAAGGCCA TCGATAATCC AACGATGTTA AATACTGCAC GCAACAGCCC ACACATGTTC
AGACAAACCC TTAAGGTATT GAATCTTGAG GACAAGGTGC CTGCCAGCGC AACCAATGAC
TATTTGCAAG ATATAGCAAA AGAAATCGGC AGGTTCAAGC TGTGCAGCTT TCCCACTGAA
ACTCAGATCA TGGGCGCGAT TTCCGACACC GTAGAGGAAC TAAAACAGGG TTTCGTAAGT
AGGAACACAC TGGCTGAATA CCAGGATGAA AAGAATAATG TGAATTACCA GGTCAAGAAC
AGGTGGGTAA TCCTACCGGG GTTGCGAATC GAAGGCACCA AAACCGTCAA AGTAGGACAA
ACGACCAAAC TAAGCGCCCT GGCCAACGTA CATTATTCAA TGAAGGACAA TCAGAATAAA
TGGCGAACCG TAAAAACGAA CATCGATGCT TCGGATCTTA CTGACAGCCT TTGGGCTGCA
TACAATAACT TGAAGGCAGA CAATTACAAT CCTTCGGACA TAATCGCCAC CGTTACCCAG
GATGGTACTG TAACCGGCTA CAATCCGGGC AAAGTCAAGG TAGCGGTTAT GTATGGCGGC
AAGCTTGCCA TCTGTACTAT CAAAGTAGTT AAATAG
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| Protein sequence | MKKGFCHNSK LLISIVLAVS LLMTSVPDAF AATINTASIS GVVTGQGGTP LPGILVLLYK
NYERISTANT DTNGQYSFGD LSSGSYRMLF SPTSYNQKNG TTYAYQRSPY SSTSLSSPIT
LSDGQSLSIN TQLENAGFIS GKVYDPDGKP LTGIMVCEVY EGSTYGRNYT NTSGEYIITQ
LPAENYKVHF DPAEHNAQYG TDYLEQWYNN KPGSNLADEV AVIQGQTINA DAYLQISSGT
VSGLKAKACG NQISLSWSAF PGAQSYSIYR TSRFFGINYQ KIDATTSSSY TDSNLPLSTD
YWYKVKPVTA IGEGSFSAPV RTKTGDTIIT DPGVIISTVA GNGTAGYSGD GGPATSAQLN
TPRGVVCDGA DNLYIVDGDN QRIRKVDTSG KISTVAGNGT HWFEGDGGPA TAAGLYDPIG
VACDSSGNLY IAESNSNCIR KVDSSGKISV VAGIVTQGWA TYEGDGGLAT SARLNYPFGV
ACDGSGNLYI ADRGNHRIRK VDTSGIISTV AGNGTAGYSG DGGPATSAQL KDPVGVACDK
NGNLYIVDKD NNRIRKVDNT GKISTVAGNG TGGYAGDGSP ATSAQIWVPY GVTFDNNGNM
YIADMNNKRI RKVDPSGIIT TVAGNGSWKY SGDGGPAEAA GLCNAVGVAC DSSGNLYIAD
SHSNCIRKVV LGTTPNNTIT FPDPNLEAAI RETLDKPTED ILNTDIENIT ELALNFKGLA
SLEGIQHFTS LQTLYLAGNG ITDLTPLQSL RNLQYLDISN NAITDLGPLT KLSNLQGLDF
SYNQLTDIQA LANLTDLRYL DFSYNDGVGV LEPLRNLIGL TDLFIAGIRD SNPAQVALCS
VSSNQSTDIG AILAGLKNLE NLDISNNELP DITFVNQLPN LKTIDASNNT IVDTTPLETL
SNLEKVSLYN NNITSISSLV KIPSLQEINI SGNQVGGISQ IEQLANLTKL DLTANPISDL
TPLTLLQDTV EVNHEEFTEP YTSWEERTDI PINRTWKIEF SHAVDTSTVN PDTIVVKEQN
NQPVTVNISR GDTDNTVLLE PPAGGYKAGQ CYYLFIKKGI GSSDGKVLQN NIRMKFTIAG
TDSPAGHKLQ SLPIVIQLVG GVLTLRDFCI FTNNILKICD QNKFIEHFIH KTNFTDDLPL
AKAIDNPTML NTARNSPHMF RQTLKVLNLE DKVPASATND YLQDIAKEIG RFKLCSFPTE
TQIMGAISDT VEELKQGFVS RNTLAEYQDE KNNVNYQVKN RWVILPGLRI EGTKTVKVGQ
TTKLSALANV HYSMKDNQNK WRTVKTNIDA SDLTDSLWAA YNNLKADNYN PSDIIATVTQ
DGTVTGYNPG KVKVAVMYGG KLAICTIKVV K
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