Gene Swol_2483 details

Gene Information

• Locus tag: Swol_2483
• ID: 4282647
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Syntrophomonas wolfei subsp. wolfei str. Goettingen
• Kingdom: Bacteria
• Replicon accession: NC_008346
• Strand: +
• Start bp: 2817595
• End bp: 2819454
• Gene Length: 1860 bp
• Protein Length: 619 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 638139368
• Product: putative PAS/PAC sensor protein
• Protein accession: YP_755143
• Protein GI: 114567989
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2206] HD-GYP domain; [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain
• TIGRFAM ID: [TIGR00229] PAS domain S-box; [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTAATA AAGACAACGC ATCGATAGCT TTGCTGAATG AGATTAAGCA ATTGCAGGAA 
GATTTAGCTC AGGCCAGGGA AAACCGCCAA ACCCTGGAGG CATTGCAGGA AAGCGAAGTC 
CGTTTTCGGG GCCTGGCTGA ATCATCTCCC GCCTTGATAT TTGTCCTGCA AAACAACCGT 
TTGCGTTATG TCAATCCCAA ATTTTTCGTC CTAACGGAAT ACAGCGAGGA AGAGTACCTG 
GTTATGGAGT TTTGGGAATT TATTCATCCT GATTTCCAGG ATTCGGTTAA AAGCAAAGCC 
CTGGCCTGGC AAAGAGGGGA AAACCAATTT GAAAAGTATG AAATGAAACT GCTAAACCGG 
AGCGGGAAAG AAATCTGGGT GGAGATATAT GCTAACCCTA TTCAATATGA AGGACAGCCG 
GCCCTTATCG GTTCCCTCTT TGATATCAGC GAACGCAAGC ACTTTGAGGA GGCTCTGCGC 
CAATCCGAAG TTCTTTACCG AACCATTTTT GAGACCACGG GAACAGCCAT GATGATTTTT 
GATAAAGATT TGTCGATATC CCTAGTTAAC AGTGAGTTTG AAGAACTTTC CGGCTATTGC 
AAAGAAGAGA TTGAAAATAG CATGAAATGG CCTATATTCG TACACCCGGA CGACCGGGAA 
CGAATGATAG AGTATCATCA ACAACGGAGA ATTGACCCGG AGCTTGCTCC CTCCCACTAT 
GAATTCAGGC TGCTGGACAA AGAGCAGAAA ACTAAAGATA TTTTCATCAC GGTAGATTTG 
ATTCCTGGAA CCAGCGACTC GGTAGTTTCC TTCATGGATA TCACTGAGCG CAAAAAGGCC 
GAAGCTCAGG TCAAGTATCT GAGCTTTAAT GATAAACTGA CCGGGCTTTA TAACCGGGCC 
TTTTTCGAAG AAGAGTTAAG CCGACTCGAT ACAGAAAGGC AATTGCCCCT GAGCCTGATT 
ATAGGAGATG TCAACGGCTT GAAGCTCATC AACGATGCCC TGGGTCACGA AAGTGGCGAC 
CGGCTATTGC GCAAGGCCGC GGAAATACTT AGAAAATCCT GTCGCAAAGA GGATATAATA 
GCTCGCTGGG GAGGGGACGA GTTTATAATA CTGCTGCCTA AAACCAAGGC CCATTGCGCG 
GAAAGAATAT GTGAGCGGAT TCAAGAAAAA TCCCAAAGCA GCGGCGATTT TCCCATTCCC 
ATAAGTATTT CCCTGGGTAC CGCCAGCAAA AATGACAGCC TGCAGGATGT ACAGGCTATT 
ATTAAGGAAG CAGAAGATAA GATGTACCGC AATAAATTAC TGGAGAGCAA GAGTGCTCGC 
AGTTCCTTTC TGCTCTCCTT GCAGCAGACC CTCTGGGCCA AAAGCCACGA AACGGAAGAA 
CATTGTCAGC ATGTAAAAGA GCTGGCCGAA CAATTAGGTG TCAGGATGGG CTTGCCCGAG 
AGTGAGTTAG ACGATCTCAG GCTGCTGGCC GTCTTGCACG ATGTCGGCAA TATAGCCATA 
CCCAATGAAA TCCTGGATAA GCCTGCCCCG CTTTCCCCCG AAGAATGGGA AATAGTAAAG 
AAGCATCCCG AAACCGGTTA TCGCATTGCT TTAACCCTAC CCGAACTGGC TCCCATCGCC 
GGAGCCATCC TGGCCCATCA CGAACGCTGG GATGGCAAGG GTTACCCTCT GGGTTTAAAA 
GCAGAAGAAA TACCCCTTAT CTCTCGCATA CTCGCCATAA TTGATGCCTT TGATGTTATG 
ATTTCCGGTC GTCCATACAA AAAAGCCCTG AGTATTGCCG AAGTCCGCAA CGAAATAAGA 
AAATGTGCCG GTACCCAATT CGACCCCAAG CTGGTAAAAA TCTTTTGCAA GTTGATTTGA 

 

Protein sequence

MGNKDNASIA LLNEIKQLQE DLAQARENRQ TLEALQESEV RFRGLAESSP ALIFVLQNNR 
LRYVNPKFFV LTEYSEEEYL VMEFWEFIHP DFQDSVKSKA LAWQRGENQF EKYEMKLLNR 
SGKEIWVEIY ANPIQYEGQP ALIGSLFDIS ERKHFEEALR QSEVLYRTIF ETTGTAMMIF 
DKDLSISLVN SEFEELSGYC KEEIENSMKW PIFVHPDDRE RMIEYHQQRR IDPELAPSHY 
EFRLLDKEQK TKDIFITVDL IPGTSDSVVS FMDITERKKA EAQVKYLSFN DKLTGLYNRA 
FFEEELSRLD TERQLPLSLI IGDVNGLKLI NDALGHESGD RLLRKAAEIL RKSCRKEDII 
ARWGGDEFII LLPKTKAHCA ERICERIQEK SQSSGDFPIP ISISLGTASK NDSLQDVQAI 
IKEAEDKMYR NKLLESKSAR SSFLLSLQQT LWAKSHETEE HCQHVKELAE QLGVRMGLPE 
SELDDLRLLA VLHDVGNIAI PNEILDKPAP LSPEEWEIVK KHPETGYRIA LTLPELAPIA 
GAILAHHERW DGKGYPLGLK AEEIPLISRI LAIIDAFDVM ISGRPYKKAL SIAEVRNEIR 
KCAGTQFDPK LVKIFCKLI