Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_2345 |
Symbol | |
ID | 4282979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 2679397 |
End bp | 2680098 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638139226 |
Product | ribosomal protein L1 |
Protein accession | YP_755007 |
Protein GI | 114567853 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0081] Ribosomal protein L1 |
TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0238114 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAGAG GAAAAAACTA CCAACAAGCC GGCGAAAAAT TCGATCGTCT TACACTTTAT GAGCCAAAAG AAGCGTTGGA ACTGGTTAAA GAGATAGCCA AAGCTAAATT TGACGAAACC GTAGAGGTGC ACATTAAACT GGGCGTGGAT CCGCGACATG CTGACCAGCA AGTGAGAGGT ACGGTTAGCC TACCCAATGG AACCGGGAAA ACTCGTAAGG TATTGGTATT TGCCAAGGGA GAGAAAATTA AAGAGGCTGA ACTGGCAGGG GCTGATTATG TTGGAGGAGA AGACCTGGCC GAAAAAATAC AGGGTGGCTG GTTTGATTTT GATGTGGCGG TAGCTACCCC CGATATGATG GCTGTTGTAG GAAAAATGGG TAAAATCCTG GGGCCTCGCG GATTAATGCC GAATCCAAAA GCAGGAACAG TAACCTTTGA TATCGAGCGT ACCATTAAGG AATTAAAGGC CGGTCGGATA GAGTACCGGG TGGACAAAAG CGCTATTGTA CATGCACCCA TTGGGAGGAT TTCCTTTGAG GTGGATAAAT TGCAAGAAAA TCTGAATGCC TTTGCTGAGG CCTTGCTCAA AGCCCGGCCA GCAGCTGCTA AAGGGCAATA TATGCGCTCA GTCACCGTAT GCTCTACCAT GAGCCCGGGA GTAAAAATTA ACCCGCTAGT TTTAATGGCG GCCAACAAAT AA
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Protein sequence | MKRGKNYQQA GEKFDRLTLY EPKEALELVK EIAKAKFDET VEVHIKLGVD PRHADQQVRG TVSLPNGTGK TRKVLVFAKG EKIKEAELAG ADYVGGEDLA EKIQGGWFDF DVAVATPDMM AVVGKMGKIL GPRGLMPNPK AGTVTFDIER TIKELKAGRI EYRVDKSAIV HAPIGRISFE VDKLQENLNA FAEALLKARP AAAKGQYMRS VTVCSTMSPG VKINPLVLMA ANK
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