Gene Swol_2326 details

Gene Information

• Locus tag: Swol_2326
• Symbol: rplP
• ID: 4282995
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Syntrophomonas wolfei subsp. wolfei str. Goettingen
• Kingdom: Bacteria
• Replicon accession: NC_008346
• Strand: -
• Start bp: 2660525
• End bp: 2660959
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 638139207
• Product: 50S ribosomal protein L16
• Protein accession: YP_754988
• Protein GI: 114567834
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0197] Ribosomal protein L16/L10E
• TIGRFAM ID: [TIGR01164] ribosomal protein L16, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000195214
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTACCC CAAAAAGAGT AAAACATAGA AAACAACATC GTCCCAGTCT TGCTGGAAAG 
GCCAACAAGG GCAATACCAT TACTTACGGG GATTATGGCC TGCAGGCTCT GGAACCGGCG 
TGGATAACCA ACCGGCAGAT TGAAGCGGCC AGAATAGCCA TTAACCGTTA TGTCAAGAGA 
GGCGGCAAGC TGTGGATTAA AATATTTCCT GATCGGCCTT TAACCGTAAA ACCTGCTGAG 
ACCAGGATGG GAAAAGGCAA GGGTTCTCCC GAGCATTGGG TGGCAGTGGT TAAGCCCGGA 
CGGGTTATGT TTGAGCTATC CGGGGTTAGT GAAGAAGTAG CACGCGAAGC CATGAGGCTT 
GCTGCACACA AGCTTCCAGT CAAATGTAAA TTCCTAAAAA GAGAAGAAAT GGGTGGTGAG 
GTTAGTGAAA GCTGA 

 

Protein sequence

MLTPKRVKHR KQHRPSLAGK ANKGNTITYG DYGLQALEPA WITNRQIEAA RIAINRYVKR 
GGKLWIKIFP DRPLTVKPAE TRMGKGKGSP EHWVAVVKPG RVMFELSGVS EEVAREAMRL 
AAHKLPVKCK FLKREEMGGE VSES