Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_2304 |
Symbol | |
ID | 4283008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 2650112 |
End bp | 2651062 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638139185 |
Product | DNA-directed RNA polymerase |
Protein accession | YP_754966 |
Protein GI | 114567812 |
COG category | [K] Transcription |
COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.044254 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGAGA TGGAAAAACC ACGTATAGAT TGTGTGGAAA AGAATTCTAG CAGCAATTAT GGAAGATTTG TTATCGAACC CCTGGAAAGA GGATATGGTA CTACTCTAGG GAATTCACTA CGCCGAGTCC TGCTTTCTTC TTTGCCGGGA GCTGCAGTTA CATCCATAAA AATTGATGGA GTACTTCATG AGTTTTCCAC CATACCCGGT GTATTGGAAG ATACTACCGA GATTATTCTT AACATCAAAA AACTGGTCTT AAGTTATACC GGCAGCGAGC GTAAAATTAT TCGTTTGGAA CAGCAGGGAC CAAAGGAAGT AAAGGCTTCC GATATTACAC CTGATGCTGA AGTTGAGATA CTGAATCCGG ATTTGCATCT GGCCAGTCTG GATGAAGACG GAAAAGTAGA AATCGAAATG ACGGTGGAGC GGGGTCGGGG TTATGTAAGT TCTGATCAGC AGCCACAGAA AAATGATGAT ATTGTGGGCT TGATTCCCAT AGATTCCATA TTTACACCAG TGAGCCGGGT CAATTATACG GTAGAGAACG CCCGGGTGGG AAAAAGGACG GACTATGATC GTCTGAACCT GGAAGTATGG ACCAATGGCA GTATAAGCCC GGAGGAAGCT ATCAGCCTTT CTGCACAAAT TTTAATTGAA TACTTAAAAC TCTTCACGGA AATAGATGAT ACCTATGCCG AGGTAGAAAT CCTGGTGGAA AAGGAAGAGG AAAAGAAAGA CAAGATTCTG GAGATGTCCA TAGAGGAACT GGAGCTTTCA GTAAGAGCAT CCAACGGCCT AAAAAGAGCC AGTATTAATA CGGTGGGAGA TTTGATTGCC AAAAACCGTG AGGAAATGAG CAAGATAAGA AATCTGGGCC AAAAATCACT GGAGGAAATT GAAAGAAAGC TTAAGGAATT AAACCTGTCG TTTAGGAAGT CAGAAGATTA G
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Protein sequence | MLEMEKPRID CVEKNSSSNY GRFVIEPLER GYGTTLGNSL RRVLLSSLPG AAVTSIKIDG VLHEFSTIPG VLEDTTEIIL NIKKLVLSYT GSERKIIRLE QQGPKEVKAS DITPDAEVEI LNPDLHLASL DEDGKVEIEM TVERGRGYVS SDQQPQKNDD IVGLIPIDSI FTPVSRVNYT VENARVGKRT DYDRLNLEVW TNGSISPEEA ISLSAQILIE YLKLFTEIDD TYAEVEILVE KEEEKKDKIL EMSIEELELS VRASNGLKRA SINTVGDLIA KNREEMSKIR NLGQKSLEEI ERKLKELNLS FRKSED
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