Gene Swol_2302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2302 
Symbol 
ID4283006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2648684 
End bp2649505 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content47% 
IMG OID638139183 
Productputative ABC transporter 
Protein accessionYP_754964 
Protein GI114567810 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID[TIGR01166] cobalt transport protein ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0179898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAGTA TTAGGGATTT GACCTATTTC TATCCGGAAG AAGATCTTCC GGCTTTAAAA 
AACATAAGCC TGGATATTCG AGAGAATGAA TTCCTGGTAA TACTGGGAAG GAATGGCTCC
GGCAAATCAA CTCTGGCCCG TTTGTTAAAC GGGCTTTTGC TTCCCAGTCA GGGAAAAGTG
GAAGTAGATG GCTGGAATAC CGCTGATGCT AACCAGATTC AGCTTATCCG GCAAAGAGTG
GGTTTGCTCT TCTCCAACCC GGATAACCAG TTGATTTCCA ACCAGGTGGA GGAGGATGTA
GCTTTCGGTC CGGAAAATTT AGGTCTTAAT ACTGCTGAGA TTCGGCGTAG AGTAAATGAT
TCACTGCGAC TGGTCTCTAT GGAATCCTAT AAAAACTCAG CTCCCGCTTT CTTGTCCGGA
GGCCAGAAAC AAAAAATAGC CATTGCCGGG GTGATGGCTA TGAAGCCGCG CTACCTGGTC
TTGGATGAGG CATTGTCCAT GATTGACCCC CGGGGAAAGC GGGAAATAAT GGAGAGTATA
CGCAGCCTGC ATAAAACTGA GGGAGTAGTA GTGATTATGA TTACCCATGA CCTGGAGGAA
GCGAGAGAAG CAGACCGGGT GGTGGTGTTG GAAGAGGGAG AAGTAAAAAC AATCTCTACT
CCCGAAGAAT TATTCCCCTC GCGTGCTTCA TTGTTAGCCC TGGGCCTGGC CCCCCTGGAA
ATAAGCCATA TTATTGCGGA AATCAACCGC CAGGGGATTT TACTAAGTAC TGATATTCTG
GATATAGATA AGCTGGTTGA GGAAATATGT CACTTCGTCT AG
 
Protein sequence
MISIRDLTYF YPEEDLPALK NISLDIRENE FLVILGRNGS GKSTLARLLN GLLLPSQGKV 
EVDGWNTADA NQIQLIRQRV GLLFSNPDNQ LISNQVEEDV AFGPENLGLN TAEIRRRVND
SLRLVSMESY KNSAPAFLSG GQKQKIAIAG VMAMKPRYLV LDEALSMIDP RGKREIMESI
RSLHKTEGVV VIMITHDLEE AREADRVVVL EEGEVKTIST PEELFPSRAS LLALGLAPLE
ISHIIAEINR QGILLSTDIL DIDKLVEEIC HFV