Gene Swol_2158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2158 
Symbol 
ID4283139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2489662 
End bp2491020 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content46% 
IMG OID638139038 
Productglycosyltransferase 
Protein accessionYP_754820 
Protein GI114567666 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID[TIGR03111] putative glycosyltransferase TIGR03111 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAA TATGGCTGGA GAGAATACTG GCATTTGGAT TATTCTGGGG TATATGGTTG 
ATGGTACCCT TGCTGGTGGA TGTATCTACG GCCATGGTCT ATTTCATCAG TTTTCTCAAC
AACAGGAAGC AGAAAGTGGA GAAAAAGGAA GAACTCTTTT TCTTCCCTTA TGTAACCGTG
ATAATTCCAG TCCATAATTC GGCAGATACC CTGGGCCATT GTTTGGACTC CATAGCCAGG
CAAACTTATC CCCGGGAATC CATCCAAGTC ATCTGTGTAA ATAACGGCAG TGAAGACGAG
AGTTTTGATA TTTTCCAGCG TTTTCAATAC CGGCACCCGG AAATGTCAGT TATGTGGAGT
TCGCTGGAAC GGGCGGGAAA ATCCATTGCG CTTAACGCCG GTGTGTATTC CGGTCATGGC
AGCTACATGA TGAATGTGGA TTCGGATACC TGGCTGGACC CTGATGCCAT ACTTAATGTG
GTCAGGGTCT TTGAAAAGGA TCCCAGCCTG GCGGCAGCTA CCGGTTCAAT CCGGGTGGAT
AAAAAGCTGG GTGAGGGTAG CAGTTTTATA GACATGATAA ATTACTGTGA AGTTATTGAG
TATATTGTAG CCTTTGACAT TGGTCGCCGT TACCAGGATC TGAAAAACTC TATTTTTACT
CTTTCCGGTG CTTTTTCCGT ATTCCGCCGG GACATAATTC TCCAGACTTT TCTATATCAG
ACCCGCACGG TTTCTGAAGA TACCGATCTT ACCTTCAATA TACGCCAGGC CATTGAGGCC
GGTGAGGGGC GGATTGGTTT TATTTCCGAT GCCATAGCCT ATGTGGAACC GATTGAAAAT
TTGAGTCGCC TCTATTCCCA GCGTCTACGC TGGCAGCGAG GGGAGATGGA AGTTACCGGG
CTATATTATG AGAAAATTCC CGGAATTTTT GGGGCCTTGT TCGATTTTGT GGGCAGGATA
CTGATTTCGG ATCATACCCT GGCCTTTTCG CGCCTGGCCT GGACTTTTTT GCTTCCCTTC
TTGTTCTTCT TGGGTTATCC CCTGCCTACA ATTGTGGTGG CGATGATAGG GATGTATATC
TGCTACATTA TCCTGGAGAG TTGTACTTTC TATATTGCTT ATAAAGGTTC GGCCCCGGAA
TTCCAGAAAG AATTGCAGAA AATATGGTGG ATTATTCTAT TTATGCCAAT ATATCGTTAC
CTGGTTTACT GGTTTCGCCT GGCCGGGATC ATTGCTGCCT TGACCGAAGA AAAGAGCTGG
AAGACCCAGA ACCCGGTAAT GCAACTACAG TCAATACTCC AGGCCTATGC CGGAGAGCTT
AAAGAAGAAA TTTCCAAAAG AAGGCAGGTG AATTCGTGA
 
Protein sequence
MIEIWLERIL AFGLFWGIWL MVPLLVDVST AMVYFISFLN NRKQKVEKKE ELFFFPYVTV 
IIPVHNSADT LGHCLDSIAR QTYPRESIQV ICVNNGSEDE SFDIFQRFQY RHPEMSVMWS
SLERAGKSIA LNAGVYSGHG SYMMNVDSDT WLDPDAILNV VRVFEKDPSL AAATGSIRVD
KKLGEGSSFI DMINYCEVIE YIVAFDIGRR YQDLKNSIFT LSGAFSVFRR DIILQTFLYQ
TRTVSEDTDL TFNIRQAIEA GEGRIGFISD AIAYVEPIEN LSRLYSQRLR WQRGEMEVTG
LYYEKIPGIF GALFDFVGRI LISDHTLAFS RLAWTFLLPF LFFLGYPLPT IVVAMIGMYI
CYIILESCTF YIAYKGSAPE FQKELQKIWW IILFMPIYRY LVYWFRLAGI IAALTEEKSW
KTQNPVMQLQ SILQAYAGEL KEEISKRRQV NS