Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_2142 |
Symbol | |
ID | 4283158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 2460563 |
End bp | 2461822 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638139022 |
Product | 3-isopropylmalate dehydratase large subunit |
Protein accession | YP_754804 |
Protein GI | 114567650 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
TIGRFAM ID | [TIGR01343] homoaconitate hydratase family protein [TIGR02083] 3-isopropylmalate dehydratase, large subunit [TIGR02086] 3-isopropylmalate dehydratase, large subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.245729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGAATGA CCATCAGTCA AAAGATCCTG GCCAGGCATG CCGGGCGTAA AATGCTGGAG CCCGGGGAAC TAATAAATTG CCAGCTGGAC CTGGTGCTGG GTAATGATGT AACCGCCCCG GTAGCTATCG CAGAATTTAA GAAATTGGGT ATAGATAAGG TCTACGATCA GAGCCGGGTA GTACTGGTTC CCGATCATTT TACTCCCAAC AAGGACATAA AGTCAGCGGA ACAGTGTAAG ATACTACGGG ATTTTGCCCG CCAGTATGAG ATAGAAAATT ACTTTGAAAT CGGCCAGATG GGAATAGAGC ACTGCCTCTT GCCCGAACAG GGTCTGGTAG TTCCGGGTGA CCTGATTATC GGGGCTGATT CCCACACCTG TACCTACGGA GCCCTGGGAG CCTTTGCTAC CGGAGTGGGT TCTACCGATA TGGCGGCGGG AATGGCTACC GGTGAAGCCT GGTTTAAGGT TCCCGAGAGT ATTAAGTTTG TCTATTATGG CCACCTGCCC CGCTGGGTAG GAGGCAAAGA CCTCATACTG CATACCATTG GTGATATTGG AGTTGATGGC GCCCGTTATA TGTCTATGGA ATTCACTGGT GAGGTTATAC AGAATCTCTC TATGGATAAC CGCTTTACCA TGGCCAATAT GGCCATAGAA GCCGGCGGCA AGAATGGCAT CTTCGCTGCT GATGAGATTA CCCTGGACTA TGTTAAAAAG CGGGTTAAGC GGCCTTTTGA ACTTTATCAA TCCGACCCTG ATGCCGTGTA TTTCGATATC AAAGAATACG ATGTATCTAA GCTGGAACCG GTGGTGGCTT TTCCCCATCT ACCGGAGAAT ACCCGTCCGG TCACCGAGGC TACTCATGTA AGCCTGGATC AGGTGGTTAT AGGTTCCTGT ACCAATGGTC GAATTGAAGA CATGGAAATT ACCGCTTCCT TGCTGAAAGG GCAAAAGGTA CACCCGGAGA TAAGAGTGAT TATTTTCCCC GGAACCCGGG AGATTTACCT GGAAGCCTTG CGCCGTGGCT ATATTGAGAC CTTTATAGAA GCGGGGGCTG TCGTCAGCAC TCCTACCTGT GGACCCTGTC TGGGGGGGCA TATGGGAATT CTGGCCCGGG GGGAAAAAGC CCTGGCTACC ACCAATCGTA ATTTTGTTGG GCGCATGGGC CACCCGGAGA GTGAAGTCTA CCTGGCTAGC CCGGCGGTAG CAGCGGCCAG TGCTGTTAAG GGCAGAATTA CTGCTCCCTG GGAGCTATAA
|
Protein sequence | MGMTISQKIL ARHAGRKMLE PGELINCQLD LVLGNDVTAP VAIAEFKKLG IDKVYDQSRV VLVPDHFTPN KDIKSAEQCK ILRDFARQYE IENYFEIGQM GIEHCLLPEQ GLVVPGDLII GADSHTCTYG ALGAFATGVG STDMAAGMAT GEAWFKVPES IKFVYYGHLP RWVGGKDLIL HTIGDIGVDG ARYMSMEFTG EVIQNLSMDN RFTMANMAIE AGGKNGIFAA DEITLDYVKK RVKRPFELYQ SDPDAVYFDI KEYDVSKLEP VVAFPHLPEN TRPVTEATHV SLDQVVIGSC TNGRIEDMEI TASLLKGQKV HPEIRVIIFP GTREIYLEAL RRGYIETFIE AGAVVSTPTC GPCLGGHMGI LARGEKALAT TNRNFVGRMG HPESEVYLAS PAVAAASAVK GRITAPWEL
|
| |