| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2132 |
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| Symbol | |
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| ID | 4283183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 2447992 |
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| End bp | 2450175 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638139012 |
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| Product | bacteriophytochrome-like protein |
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| Protein accession | YP_754794 |
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| Protein GI | 114567640 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.205555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGACA ATAACTTATT GCCATTAATA ATTGAATTAA ATGAAAACAC TGATATTATG
ATTGCAGTTA TAAGAGGAAG AAAATTTTCT TATGCAAACC CGAAACTGCA GAATGATTTA
GGATATAGCC TGGAGGAGTT TTATTCCATG GATTTCTGGG ATATAGTCCA TCCAGATTTG
CGTGAAATGA CGCGGCAAAT GGGATTGGCC CGGCAGCGTG GGGAAGAGGT GCCGGATAGT
TATGAACTGC GACTGCTGGG GAAGCAGGGG AACTGCTTTT GGGTACATAT TAAGGCTAAA
AATACTAGTG TTGAGGGAGA GCGGACGGTA ATAGTTTCGG CTTTTGATAT CAGCGAGCGC
AAGGCTATCG AAGCTGATTT ATTGCGCCAG AAAGAATCCT TGTTGCTCTT GCTGGAAAAC
AATCCGGTGG CCACTGTCCT GGTCGATCCT GAGGGGAAAA CCCTCTATGT TAATCCGCGT
TTTATAGAAT ATACGGGATA TGGCCTGGAA GAGGTCAGTA CCAGCCAGGT TTGGGAAGAG
AATGTGCTGG CGGAAATGCC CAATCGCCGG GAAATTATGC GCTCCTGGTA CCAGAACTTG
AAAGAAATAG GATACTCCAA GGGAAAGGTC GTTTTGCGCC GCCGGGATGG GGAAAGGCGC
TTTTTTAATA TACATAGCGT AGCGCTGCCG GACGGTCATA TTGTGCTGGC GGCCTGGGAT
ATCAACGATC AGGTAGAGGC CCAGAAGATT TTGCAAGAGA GCCAAGACCG CTTCAAGGCT
TTATCCGAAG CCAGTTTTGA GGGGATTATC ATTACTGAAA ACGGGATTTG CATAGAAGCC
AACCAGGCTG CTGAAGAACT TTTTGGCTAC AGCCGGGAAG AGCTTATCGG GCTTGATGTT
ATGAGTTTTA CCGCACCGGA AGCCCGGGAA ATAGTCAAGA GTCAGATGAT GAGCGCTAGC
CAGGCCCCCT ATGAAGCCAT AGTCTTGCGC CAGGATGGGA CCAGGGTTCC AGTTGAGATT
CAAGGCCGGA GTTTTATCTA CCAAGGCCGT GAAGTCAGGG CGGCCGCTAT CCGCGACCTC
AGTGAAAGGA GGAGGGCGGA GGAAGAGATT TATCGTCAAA GCACCAACCT GCAGGCGCTG
TTTTACAATA CCCCGGATGC AGTCGTTCTC TGCGATTCTC TGCATAGGAT ACTGGATGCA
AATCCTCGGT TTTTTGAATT TTTTGGCTAT AGTATTGAAG AATGCCGGGG GTTTATTCTG
GAGGAAGTGC TGGTCCCGGA AGAAATGAGA GAAGAATCCG CTTTCATGTC CAGGATGGTT
TCCGATGGGC AGGCAATTAG TCGGGAAAGC ATGAGAAAAA AGAAGAACGG TGAATTGCTG
CCGGTACTGG TTACCATGAT TCCCATTGCC AGTTCGGGCT ACTATGTTCT TTATACAGAT
ATCAGCGAGC GCAAAGAAGC GGAAGCCACG ATTCAGCAGC AGATAAAAGA ACTGGAAGCC
AAAAATGCCG AGATGGAGCG TTTTACCTAT ACGGTATCAC ATGATTTGCG CAGCCCCCTT
ATTACTATAA AAGGTTTTTC CGGGCTGCTC CTGCAAGACC TGGAGAAAGG TAAAACCGCT
CGCCTGCAAA AAGACATACA GCGAATTATC AATGCTTCAG GCAAGATGGA GGAACTGCTG
GAGGATCTCC TGGAGCTCTC TCGTATCGGC CGTATATTAA ACCCTTACAG CAACTTCCCC
ATGAACCAGC TTTGCTTCGA GGTGGTTGAA TTACTTTCCG GGCCTATCAG CCAGAAAAAG
GCGGAGGTAG TGGTAGCTCC TTATATGCCT TGGGTGCAAG GTGATCGCAG GCGAATAGCT
GAAGTCGTAC AAAACCTGCT GGAAAACGCC ATCAAGTTTA TGGGGGACAA TGAGCGCCCG
CGAATTGAAA TAGGATATTT CCCCGGTGAA GGCGAGTGCG TCTTTTTTAT AAAAGACAAT
GGTATAGGCA TAGAAGCCAA ATACCGGGAA AAGGTATTTG GGCTTTTCGA TAAATTAGAT
CAAAGTACTG AAGGTACCGG GATCGGATTG GCTCTGGTTA AAAGGATTAT TGAGCTTCAC
CAGGGGCGTA TTTGGGTGGA GTCAGCCGGA GCGGGCCAGG GCAGTACTTT CTATTTTACC
CTGCCTGATG TTCCCGATAG GTAA
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| Protein sequence | MIDNNLLPLI IELNENTDIM IAVIRGRKFS YANPKLQNDL GYSLEEFYSM DFWDIVHPDL
REMTRQMGLA RQRGEEVPDS YELRLLGKQG NCFWVHIKAK NTSVEGERTV IVSAFDISER
KAIEADLLRQ KESLLLLLEN NPVATVLVDP EGKTLYVNPR FIEYTGYGLE EVSTSQVWEE
NVLAEMPNRR EIMRSWYQNL KEIGYSKGKV VLRRRDGERR FFNIHSVALP DGHIVLAAWD
INDQVEAQKI LQESQDRFKA LSEASFEGII ITENGICIEA NQAAEELFGY SREELIGLDV
MSFTAPEARE IVKSQMMSAS QAPYEAIVLR QDGTRVPVEI QGRSFIYQGR EVRAAAIRDL
SERRRAEEEI YRQSTNLQAL FYNTPDAVVL CDSLHRILDA NPRFFEFFGY SIEECRGFIL
EEVLVPEEMR EESAFMSRMV SDGQAISRES MRKKKNGELL PVLVTMIPIA SSGYYVLYTD
ISERKEAEAT IQQQIKELEA KNAEMERFTY TVSHDLRSPL ITIKGFSGLL LQDLEKGKTA
RLQKDIQRII NASGKMEELL EDLLELSRIG RILNPYSNFP MNQLCFEVVE LLSGPISQKK
AEVVVAPYMP WVQGDRRRIA EVVQNLLENA IKFMGDNERP RIEIGYFPGE GECVFFIKDN
GIGIEAKYRE KVFGLFDKLD QSTEGTGIGL ALVKRIIELH QGRIWVESAG AGQGSTFYFT
LPDVPDR
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