Gene Swol_1966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1966 
Symbol 
ID4283358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2241822 
End bp2243396 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content45% 
IMG OID638138849 
Producthypothetical protein 
Protein accessionYP_754634 
Protein GI114567480 
COG category[N] Cell motility 
COG ID[COG5492] Bacterial surface proteins containing Ig-like domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTATCTA TAACATTTAA CCTGCTCCCT CTGTTAAGCC CGGCGGAAGC AGCATCCGGG 
CTTGAAATCA CTGGAGATGG AGTAGCAAAT CCGCTGAGTT TAACCTTAAG TGATTTGCAG
GAAATGGAGC AATATCAGCA TGTCTACAGT ACTATTAATA CCTGGCCCAG TAAGAAACTC
TATGTAGCCC AGGGGGTCAA ACTAAAAGAT TTACTAGCTT TAGCGGGTTT AAAAGAAAAT
GCCCAATTAA TTATATTTAC TTCTAGTGAC GGTTATTCAG TTACGCTGAC AGTGAAAGAA
TTGCTCAAGG ACAAGCGCTA TTATTTCCCC TATTTCCAGG AGAATAGTGT AAACGATGGA
ACCATACCGG GTTCTCCCAG GGATGCGGTT GAAGTGCAGC CTATTCTGGC CCTTTTAAGT
GCTGAGAGTA GTAAGAATCC CGCTGATATG AATGATATGG ATGCGCTATT GTTGGTATGT
GGACAACGGG CAGTAAGCGA GCAGACCAAT AGTATTTTTC TAAAATACAT AAGTAAAATC
GAGGTACTGA CTTCTAAACC GTCAAAATGG GATGCACCCA GGGCCAATAT AGGCAGTGGA
AAGGTAGCTG AAGGAACCTT AATTGAATTG AGCAATAAGC GTAATGATAC TGACAAGATT
TATTATACTA CGGACGGAAG CACCCCAACT ATAAACAGCC CTATATTTAA CTGGAGCGCC
AGTCGATGGT GGAGCCAACG CCCGGATAGT TTAAACGAGA TTAATAAGCC GATAGAGATT
AAAAAGGATA CCCTTATTAA GGCCATAACC ATTGGCCCTG GTAAAGAGGA CAGTGATGTG
GTTACCTTTA CCTATCAACC TGGCTTAAAG GATGAGGATG CTCCGGTAAA GTCGGGTTCG
CCCTCTGGGC TTAGTCTCGA TGAGAAGCTG GTTAATCTCA AAATTGGCAG TGTCATTGAG
TTAACAGCAA TACTTGATTC AGATAATAAT ACTGAGCAGG GCTTAATCTG GAGCTCAAGC
GACACTCGGG TAGCTACAGT TGATAACCAT GGTTGGGTAA CAGTTGTTGG TCAAGGGATG
GCTACCATCA CTGCAAAAAC AAAAGATGGC AGATTTACGG CTAGCTGTAT GGTTAATGCC
AGTGCGGGAG TAAGCAGTCC AAGTCTTCCT CCCCAGAGCA GCAGCTCTGA GAGCCAGGTG
GGAACGCAAC AGAACCCGGA GGTATTGCCG GCCCCACAAG ATGATCCGCT CTACCAGCCA
GAAAAGGAGC GTACTGTAGC CAGTGTGGCT AGTAGTAGTG ATACCCCGGA GCCCCCAACA
GCATCAACAA CAGACGATAA GTGGGAGTAC CTGGCCAAGA AGGATAAAAC TGCTGGATTG
TATACGACTA ATATTGCTGT CCAGCCCCAA GAGCCAGGAG GGCAAATATA TGAGCTAAAA
GTGGATACGG CTGCATTGCA GTTGCAGATG GAAACAAAAA TATGGAGCAT CTATATCCTG
CTAGTTTACT TAAGCTTATT TATTTTTGGC GCCATAAATA AATACATCGA ATATACGAAG
GAGGTAGCCG GGTGA
 
Protein sequence
MLSITFNLLP LLSPAEAASG LEITGDGVAN PLSLTLSDLQ EMEQYQHVYS TINTWPSKKL 
YVAQGVKLKD LLALAGLKEN AQLIIFTSSD GYSVTLTVKE LLKDKRYYFP YFQENSVNDG
TIPGSPRDAV EVQPILALLS AESSKNPADM NDMDALLLVC GQRAVSEQTN SIFLKYISKI
EVLTSKPSKW DAPRANIGSG KVAEGTLIEL SNKRNDTDKI YYTTDGSTPT INSPIFNWSA
SRWWSQRPDS LNEINKPIEI KKDTLIKAIT IGPGKEDSDV VTFTYQPGLK DEDAPVKSGS
PSGLSLDEKL VNLKIGSVIE LTAILDSDNN TEQGLIWSSS DTRVATVDNH GWVTVVGQGM
ATITAKTKDG RFTASCMVNA SAGVSSPSLP PQSSSSESQV GTQQNPEVLP APQDDPLYQP
EKERTVASVA SSSDTPEPPT ASTTDDKWEY LAKKDKTAGL YTTNIAVQPQ EPGGQIYELK
VDTAALQLQM ETKIWSIYIL LVYLSLFIFG AINKYIEYTK EVAG