Gene Swol_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1890 
Symbol 
ID4283436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2150887 
End bp2151675 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content48% 
IMG OID638138773 
ProductABC-type zinc transport system ATP-binding protein 
Protein accessionYP_754559 
Protein GI114567405 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAGAA TGGATAGAGA AGAAAGAAAA AAAGTTGTCG AAATAGAAAA TCTGCTAGTA 
AAGCTGGATG GACGAACCGT ACTGGAAGAG GTGAACCTCA GCGTATATGA AAAAGATTTC
CTGGGGATTA TTGGTCCCAA CGGCGGGGGA AAAACTACGC TGTTGAAAAC TATTCTGGGG
CTGGTAACTG CGGAAGCCGG AACTGTCAAA ATAATGGGAA AAAGAATAAG TGAAAACAGA
GGGCAGGTGG CATATGTTCC ACAATACGCT GCCTTTGACC GCAGCTTTCC GGTTAATGTC
TGGGAAGTGG TTTTGATGGG ACGCCTGGGT TCAAAAAGAG GGAGGAGCTA TTCCGGGCTG
GATCAGGAGA TCGCCCGGGA AGTACTGAAA CGGGTGGAAA TGTATGAACT GCGACATCGC
CGCATAGGTG AGCTTTCTGG GGGTGAAATA CAGCGGGTGC TGGTAGCCCG GGCTCTGGCG
GGGCGTCCGG AAATCTTGCT CTTGGACGAG CCCACCGCCA GTATTGATTC CCGTTTTCAG
GCCGGCTTTT ATGAATTGTT AGAGGAGCTC AATCGTGAGA TGACTTTAAT CATGGTTTCC
CATGATATCA GTGCTATTTC GATATATGTG AAGACCCTGG CCTGTTTAAA CCGTAAACTC
TATTACCAGC ATAGCAAGGA ATTAAGCCCG GAAATGATAG AAAAGGGTTA CCAGTGCCCG
GTAGAATTAA TAGCCCATGG AGTGCCTCAC CGGGTGTTAG CAGCTCATGA TGGGGTGGTA
GGAAGCTGA
 
Protein sequence
MDRMDREERK KVVEIENLLV KLDGRTVLEE VNLSVYEKDF LGIIGPNGGG KTTLLKTILG 
LVTAEAGTVK IMGKRISENR GQVAYVPQYA AFDRSFPVNV WEVVLMGRLG SKRGRSYSGL
DQEIAREVLK RVEMYELRHR RIGELSGGEI QRVLVARALA GRPEILLLDE PTASIDSRFQ
AGFYELLEEL NREMTLIMVS HDISAISIYV KTLACLNRKL YYQHSKELSP EMIEKGYQCP
VELIAHGVPH RVLAAHDGVV GS