Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1866 |
Symbol | |
ID | 4283482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 2129585 |
End bp | 2130658 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638138749 |
Product | O-sialoglycoprotein endopeptidase |
Protein accession | YP_754535 |
Protein GI | 114567381 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.561785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCCCTG CGGTCGCTAT TAAGGTTGCA GCCATGGGGG GAGTTAGAAA AGAGGTGGTT TTAGTGCAGG AAAGTCTAAT TCTAGGAATT GAAACTTCGT GCGATGAAAC GGCGGCGGCC ATAGTGCGCA ACGGAAAGGA AATCCTGTCC AATATAGTAA ATTCCCAGAT TGATATACAT CAACAGTTTG GTGGAGTGGT TCCGGAAGTT GCTTCCCGTA AGCATATCGA AAATATTGCT GGGGTAGTGC ACAGAGCATT TTCCGAAGCC CAGCTGGCTT ATTCCGCTAT TGATGCGGTA GCTGTAACCA ATAGACCAGG ACTGGTCGGA GCTCTGCTGG TGGGAGTATC CTTTGCCAAA GCTTTTGCCT ATGCGTTGGA GAAACCGCTG ATTGCAGTAA ACCACCTGCA CGGGCATATT TATGCCAACT TTCTGGAGCA TAGGGATATA GAATTCCCGG CCATTTGTTT GGTAGTCTCC GGGGGCCACA CCAGTCTCCT CTTGATGAGC AATCCGAATA AGATGGAAGT GCTGGGAGAG ACCCGTGATG ATGCAGCTGG GGAGGCTTTT GACAAGGTGG CCCGCTTTTT AGGTTTGGGT TATCCCGGTG GACCGGCTAT ACAGGAAGCA GCTACCAAAG GAAAAGCTGG CCAGTTACAG TTACCCCGGG TTTTTCTGGA TAGGAATGAT TTTGAGTTCA GCTTTAGCGG CCTCAAGACC GCCGCTATGA ACCAGTGGAA CAAATTACAG CGCAGGGGCC AGGCCAATGT CTTTGATATG GCCGCCGAAT TCCAGGCGGC GTTGGTTGAA GTCCTGGTGG AAAAGAGCAT CAAAGCAGCA GCGAAGTATC AAGTCAGAAC GATTATGATG GCAGGTGGTG TAGCCGCTAA TCAGGAGTTG CGTAATTTGA TGAAAAAGAG GACTAAAGAA GCTGGTTTGA AGCTCTTCTA TCCTTCCCTG AAACTCTGTA CTGATAATGC TGCCATGGTT GCCGCCAATG CCCATTATCA CTATGGAAAT AGGAGTTTTG CCCCTCTTTC ATTAAATGCC TATCCCAGCC TATTGTCCCT GTGA
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Protein sequence | MLPAVAIKVA AMGGVRKEVV LVQESLILGI ETSCDETAAA IVRNGKEILS NIVNSQIDIH QQFGGVVPEV ASRKHIENIA GVVHRAFSEA QLAYSAIDAV AVTNRPGLVG ALLVGVSFAK AFAYALEKPL IAVNHLHGHI YANFLEHRDI EFPAICLVVS GGHTSLLLMS NPNKMEVLGE TRDDAAGEAF DKVARFLGLG YPGGPAIQEA ATKGKAGQLQ LPRVFLDRND FEFSFSGLKT AAMNQWNKLQ RRGQANVFDM AAEFQAALVE VLVEKSIKAA AKYQVRTIMM AGGVAANQEL RNLMKKRTKE AGLKLFYPSL KLCTDNAAMV AANAHYHYGN RSFAPLSLNA YPSLLSL
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