Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1780 |
Symbol | |
ID | 4282742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 2033639 |
End bp | 2034154 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638138663 |
Product | phosphoribosylaminoimidazole carboxylase |
Protein accession | YP_754449 |
Protein GI | 114567295 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.026847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCAGAG TGGGAATTAT TATGGGAAGT GATTCCGACC TGGCTATAAT GAAAGATGCT GGGGATATAC TAAAAGATTT TGCTATAGAA TATGAATATA CGATCTGTTC GGCCCACCGT TTGCCTGCTG AAACCGCGGC CTATGCAAAG GAGGCTCGGG ACAGGGGAAT CGAAGTAATA ATTGCCGGAG CTGGTGGTGC CGCACATCTA CCTGGAGTAA TTGCCTCTTA TACTCTGCTT CCGGTTATCG GGGTTCCTGT AAAAACCAGC AGTCTTTCCG GGGTAGACTC GCTTTACTCC ATTGTGCAAA TGCCCCGGGG AATCCCTGTA GCTACGGTAG CCATCAATGG TAGTGCCAAT GCGGCCCTCC TGGCCTTGCA GATTTTAGCC CTTCATGATG AAAGCATTTG GCAGCACTTG CAAGAATATC GAAATAAAAT GGCCCGGGAA GTTCGGGAAA AAGACCAGAA GTTGCAAGAC CTGGGCGCCG ATGCGTATTT GAACATAAAA AAATAG
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Protein sequence | MPRVGIIMGS DSDLAIMKDA GDILKDFAIE YEYTICSAHR LPAETAAYAK EARDRGIEVI IAGAGGAAHL PGVIASYTLL PVIGVPVKTS SLSGVDSLYS IVQMPRGIPV ATVAINGSAN AALLALQILA LHDESIWQHL QEYRNKMARE VREKDQKLQD LGADAYLNIK K
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