Gene Swol_1622 details

Gene Information

• Locus tag: Swol_1622
• ID: 4283666
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Syntrophomonas wolfei subsp. wolfei str. Goettingen
• Kingdom: Bacteria
• Replicon accession: NC_008346
• Strand: +
• Start bp: 1846415
• End bp: 1848340
• Gene Length: 1926 bp
• Protein Length: 641 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 638138501
• Product: response regulator receiver protein
• Protein accession: YP_754294
• Protein GI: 114567140
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain
• TIGRFAM ID: [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.923164
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATAACA AAAAGGGCAT AAGTATTATA TTAATAATGT TGATTATATC GACTTTATTG 
GCAGGTTGTT CCCAGGAACT TTCGCCTAAA CATCCCAGAG CCGTTGAAGG AATGCTCGAC 
TTAAGCGAAT GGCGGTTTGA CCAGGATCTT ATAGGATTAG ATGGGCAATG GGAATTTTAC 
TGGAATCAAC TATTGGAACC ATCAGATTTA AAAGTAACAG AAATAAGTAG GACTGGGTAT 
ATTGAAATCC CCGGTTCGTG GAACCATTAT CAACTTAACG ACATGGAATT ACCCGGAGCG 
GGTTATGCTA CCTATAGATT AATCATTAAA ACCGGGGAAA AAGAGCGATT AGCTTTAAAA 
ATACCTAGGA TTTTTACTGC TTACAAACTT TGGGTTAATG ATGAACTAAT TGCCTCCTCC 
GGTATAGTAG GTCAAAACAG AGAAAGCATG GCCCCTCAAT ACCTTCCCCA GTTAGCTTTT 
TTTGCGGCAC AAAAGGGTGA AAATGAAATT ATCCTGCAAG TATCTAATTT CTATCATCGA 
AGTGGCGGGA TACTGGAGCG TTTAATACTA GGTAGTGAAG AATTGGTTCT TAACTTGCGG 
TATAAGAATA TGGCTTACGA GCTAATTCTA TTTGGCTGTA TAATGATTAT TGGAGCTTAT 
CATATAGCTC TATTTTTCTT TAGAAGACAG AATCGTTCTA CTTTATACTT TGGTTTGTTC 
TGTATATTTA TTGGAATTAG AACCTTACTG GTAGGGGAAA GACTCTTTAT TTACTTGTTT 
CCAGGTTTTA ATTGGGAAGT AGCCCACAAA ATGCAAACAC TGACCTTCTA TCTAGGGGTG 
CCATTGATAG TAATGTTCTT TAAATTCGTT TTTCCTAAAG ACATTTCCGA GAAATTTGTC 
CGGTTCATCA TCATTATTGG ACTCGTTTTT GGAGGACTTG TTCTCCTTAC TCCAGCAAGA 
ATATTTACTA CTTTTAATCC TATCTACCAA ATTGTTGCTT TAATCGTAAT CATCTATTTA 
ACTTATATCT TCTTCAAAAA ACTATTTAAA AAAGATAAAA ATATCGGGTT GATTGTGGCC 
GGTGGTCTGG CATTATTCAT TACCAGCTTG AATGATATTA TTTTCTTAAG CATATGGCTA 
AATGATAATG GGTCTACACT TTTGCGATCT ATTTTTAGAA CCGGTAATCT ATCATCTATT 
GGCCAAATGA TATTTGTCTT TACTATTTCT ATTGTATTAG CCAAGCAGTT TTCTGAAGCG 
ATGGAAAAAG AAGAGGTAAT GACCATGCAA TTAAAGGAAA TGAACCTTAA TCTAGATCAA 
GTGGTCAAGC AACGAACTAA AGCTCTGGAG GAGTCGAAGG AAAAAATAGA ACACCAGAAA 
CTTGAATTAG AAAAAACAAA TCAAGCCCTC CAACTACTCT CATTAAAAGA CCCTTTAACC 
AACTTATGGA ACAGGCGTAA ATTCGATGAG ATTATAGAGA ACGAATGGAA TCGTTGTTTT 
AGAAACAGAA AATCTATTTC AGTAATGATT TTAGATATTG ATTTATTTAA AGGTTATAAT 
GACCGTTATG GTCATTTGGC TGGGGACGAA TGCCTAATAC AGGTTGCAAA GGCAATTGCC 
AATTCCTTTA AGCGTGCCAG TGACCTGGTA GCTCGCTATG GGGGTGAAGA GTTTGTAGTA 
ATCATGCCTG AGTGTAAAAA AGATGAAGCT ATAAAAATGG CTTTATTATT ATGCGAAAAA 
ATTGAGGGGC TTAAAATACC TTATGGCGAC TCTTCCTTAA GCAAGTATGT GACGGTTAGC 
ATTGGGGTTA CTTCCAAGAT TCCGGATAGT AACTCTTCCC CTACAGATTT AATCTTACTA 
GCTGATAAAG CCCTGTACCA AGCAAAAAAT GCCGGCAGAA ACCAAATCAA ATTTTTAGCC 
GAGTAA 

 

Protein sequence

MHNKKGISII LIMLIISTLL AGCSQELSPK HPRAVEGMLD LSEWRFDQDL IGLDGQWEFY 
WNQLLEPSDL KVTEISRTGY IEIPGSWNHY QLNDMELPGA GYATYRLIIK TGEKERLALK 
IPRIFTAYKL WVNDELIASS GIVGQNRESM APQYLPQLAF FAAQKGENEI ILQVSNFYHR 
SGGILERLIL GSEELVLNLR YKNMAYELIL FGCIMIIGAY HIALFFFRRQ NRSTLYFGLF 
CIFIGIRTLL VGERLFIYLF PGFNWEVAHK MQTLTFYLGV PLIVMFFKFV FPKDISEKFV 
RFIIIIGLVF GGLVLLTPAR IFTTFNPIYQ IVALIVIIYL TYIFFKKLFK KDKNIGLIVA 
GGLALFITSL NDIIFLSIWL NDNGSTLLRS IFRTGNLSSI GQMIFVFTIS IVLAKQFSEA 
MEKEEVMTMQ LKEMNLNLDQ VVKQRTKALE ESKEKIEHQK LELEKTNQAL QLLSLKDPLT 
NLWNRRKFDE IIENEWNRCF RNRKSISVMI LDIDLFKGYN DRYGHLAGDE CLIQVAKAIA 
NSFKRASDLV ARYGGEEFVV IMPECKKDEA IKMALLLCEK IEGLKIPYGD SSLSKYVTVS 
IGVTSKIPDS NSSPTDLILL ADKALYQAKN AGRNQIKFLA E