Gene Swol_1595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1595 
Symbol 
ID4283689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1819077 
End bp1821362 
Gene Length2286 bp 
Protein Length761 aa 
Translation table11 
GC content46% 
IMG OID638138474 
ProductDNA internalization-related competence protein ComEC/Rec2 
Protein accessionYP_754268 
Protein GI114567114 
COG category[R] General function prediction only 
COG ID[COG0658] Predicted membrane metal-binding protein
[COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) 
TIGRFAM ID[TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTTGT CATGGTTTGA GATTTTTATA GTACTGGCGG CTTCCGCCTG TTTCAGCTAT 
TATGCTTGCT GGCCTTTATT TATCTTAATC TTTTTATTTC TCCTGGCAGG AGGAATTTGG
GGTGGGAAGC ACTCTCTGAG GTCTTATAGC GTTCTAGCCG TCTTGTTAGT GGCGGTGCTG
TTTTTTAACT GGATGCAGAA GCCGGTACCG CTTAATTTAA AAGCACAAGA CGGAGTGGTT
TTAACTGGCC GGGTGGAGAC AATTCCCGAA TTTGATGGTA ATAGGAGCAG TTTTGTACTT
AAGAGCAAAG AGTCCCAAAG GGCCATGAAG AAAATTCAGG TATTCTGCAA CTTCGCAGCC
CCAGTACAGA AGGGTGAAGA AATATCACTG CGGGGAGATT TAAAGCTTCC CCGTCCTCCC
GGAAATCCCG GAGAATTCGA TTATCCACAC TATTTATCCT ATAGTGGGAT TTATTATTTA
ATGTCGGTTA AAGAAGAAAA TGCTATTACG GTAATATCCG CTCCGGGACG GGCGGAAAGC
TTTTTGGCCG CTATTCGAAA CTCGGGAGAA AGAATTATTG AGAATCGCCT TCCACCGCAC
GAAGCAGCCA TACTTATGGG AATGCTGCTG GGCAAAACCG ATACTATGGA TCCCGAACAA
TACCGGGACT TTCAGAAAAG CGGGATAGTG CATATTTTTT CGGTCTCCGG ACTCCATGTG
GGCTTTCTTC TTTTGCTGAT GGCCTGGCTT ACTTCCCTCT GCCGAATGTC TCCGGGGATG
AAGTTGGTGG TTATCAGCAT TTTTCTTTTG CTTTACGCCT CGGTGATAGG ATGGCCAGTA
TCGGTAATTC GTGCGGTGAT AATGGCCATT CTAGGACTGC TGGCCTATTA TTCAGGGAGA
GAAAATGCTC TTCTTAATGG TCTAGGGCTG GCCGGGACCA TAATAATCGT GAGTGACCCC
TTTGCTCTAT TCAAAATATC TTTTCAGCTA TCTTTTGTGG CCACCTGGGG CCTGCTTTAC
CTTTTTCCCC TCATGAAAAA AAGACTTCAG TATACTAATC GCCTCTGGGA TTTGCTCCTT
ATTCCTTTAT CGGCGCAACT GGCCGTACTC CCTCTCACAG CCTATCATTT TAACCTGTTC
AGCCCGGTAT CTTTATTGAG CAATGTACTT ACCTCTTATC TATCCGGAGC CTGTGTAATC
CTGGGGTTGC TGGCTTTAAT GCTGGCCACT ATCTGGCCTT GGCTGGCCGG TATATTCCTC
TTCCCGGCCG GGTTTTTTAT TGAATTGATT ATGGGCTTGA ATAGCGCCGT CTTGAAGCTG
CCTCTGGCTT TCTGGTGGGT TGCAACTCCG CACTTTATCC TGATAATCGT CTATTATCTT
GGCCTGCTCC TTCTAGCTCT ATCCTGGAGT AAAGACTATA GAAAAAAGGA ATTCAAGTAT
CTTGGGCTTT CCCTGATGTT GCTCTTTATT TTGCTAATAT CATTACCCGC CAGCATGTAC
CAGCGGGGGG TGATGGAGCT TGTGTTAATC GATGTGGGGC AAGGGGACAG TATTCTTTTA
AAGAGTCCCG GAGGCAAATT TGTCCTGGTA GACGGTGGGG GAAGCCATTA TTCTGATCCA
GGCAGTAAGA AATTGCTACC CTACTTGCAT CATCGTGGTA TAAGGAAAAT TGATGTGATT
ATCAATACTC ACCCGGATAT AGACCATATC CAGGGGCTGG AGAAAGCCAG TAAGGAGCTC
CGCGTAGCTC ATATTGCCTT ACCCTATTGT TTAAAGGATG CTAAAGAATA TGAGGAACTC
AAGGGGATTG CGGCCAGGAA AAACATTCCT TTAATTTTCC TGAAAAGTGG CCAGCGGCTC
AACCTAGAGA AGGGATGCGA ACTGGCTGTT CTTTATCCGG AAGAAGAGCG TTATCAAGGA
AACAACTTTA ATAATAAATC GCTGGTATTG CACGGTCAGT ACGGAGCTTT TTCCTTTTTA
TTGACTGGTG ATGTGGAGAA AGAAGGAATG CAGGAATTGC TGCAGCAGGG AAAGTTGGGG
ACAAGTACGG TACTAAAGGT ACCACACCAC GGCAGCAAAG GCTCCCTTTT GCCAGAATTT
TACCGAGAGC TTAATCCCCG CTGGGCTATT ATTTCCGCTG GAGCCAACAA CAGCTTTGGC
CACCCTCATG CCAGCGTGTT AAAAGAACTG CAAGAGCAGG GGATAGAGGT TTTACGCACG
GATGAGGACG GAGCCATAGT TTTCCAGAGC AATGGCCGCT GGGTTAAAAT AAAAACCGCG
CTGTAG
 
Protein sequence
MPLSWFEIFI VLAASACFSY YACWPLFILI FLFLLAGGIW GGKHSLRSYS VLAVLLVAVL 
FFNWMQKPVP LNLKAQDGVV LTGRVETIPE FDGNRSSFVL KSKESQRAMK KIQVFCNFAA
PVQKGEEISL RGDLKLPRPP GNPGEFDYPH YLSYSGIYYL MSVKEENAIT VISAPGRAES
FLAAIRNSGE RIIENRLPPH EAAILMGMLL GKTDTMDPEQ YRDFQKSGIV HIFSVSGLHV
GFLLLLMAWL TSLCRMSPGM KLVVISIFLL LYASVIGWPV SVIRAVIMAI LGLLAYYSGR
ENALLNGLGL AGTIIIVSDP FALFKISFQL SFVATWGLLY LFPLMKKRLQ YTNRLWDLLL
IPLSAQLAVL PLTAYHFNLF SPVSLLSNVL TSYLSGACVI LGLLALMLAT IWPWLAGIFL
FPAGFFIELI MGLNSAVLKL PLAFWWVATP HFILIIVYYL GLLLLALSWS KDYRKKEFKY
LGLSLMLLFI LLISLPASMY QRGVMELVLI DVGQGDSILL KSPGGKFVLV DGGGSHYSDP
GSKKLLPYLH HRGIRKIDVI INTHPDIDHI QGLEKASKEL RVAHIALPYC LKDAKEYEEL
KGIAARKNIP LIFLKSGQRL NLEKGCELAV LYPEEERYQG NNFNNKSLVL HGQYGAFSFL
LTGDVEKEGM QELLQQGKLG TSTVLKVPHH GSKGSLLPEF YRELNPRWAI ISAGANNSFG
HPHASVLKEL QEQGIEVLRT DEDGAIVFQS NGRWVKIKTA L