| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1487 |
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| Symbol | |
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| ID | 4282282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 1707919 |
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| End bp | 1710009 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638138364 |
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| Product | sigma-L-dependent transcriptional regulator |
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| Protein accession | YP_754162 |
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| Protein GI | 114567008 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTAG GCGAAATAAT GAGCCCCAAC CCTGTTTTAC TAAGACCGGA ACAATCAATC
CGCGAAACAG TAACCCTTTT CCTGGAGCGG AATATTGATG GAGCTCCGGT GGTGGATGAG
AATAATCAAA TTATCGGACT TTTTACCAAG ACCCATGTTT ATCGAGCGAT AGAGCAGGAA
ATGGATATGC TTCAACCCAT AGAGAAATTA ATGAAGCGTG ATATTATTAT TGGACACCCG
GAAGAAGAGA TAGAAGATGT ACTATATCCC GGACTAGGGA GATTGCCCAT AGCAGATGAA
ACCGGAATTA TGGGCATGAT TACCCGGACT GATTTGGCCC GGGTTTTCCT GGAGTCATAT
AGAAATATAT CCAGTGAACT AGATGCTATT ATCAACTCTA CCCATAACAT GATTGTTTCC
GTAGACAAGC AATCCAGAAT CAGGGTATTC AACCGGGCCG CTGAAAAACT TTTAAAACAA
AAAGCAGAGA ATGTAAAAGG CAAGCTTATC GATGATGTAT ACCCTACCAG CCGTCTTACC
AATATAATCA AGTCGGGGCA GGTCGAGACC TTGCAGAAGA TTATGTTGAA TAACCACTAT
TTTATCTCCA ATCGTTCACC GATAATTAAA GATGGCGAGA TAATTGGAGC AGTTGGTGTT
TTGCAAGATA TTTCCGAACT GGAGGAGTTA TCGCGGGAAT TAAAATATGT TAAAGAACTC
AACGAAGAAC TGGATGCTAT TATTGAATCA TCGTATGACG GTCTTTATAT TACGGATGGC
AATGGGATGA CATTGCGTTT AAATAAAGCC TTTGAAATGA TTACCGGGAT AAATGGACGC
GAGTTCTTGG GAAGGCATGT GGATGACATA GCCCGGGAGG GTATTGTTTC CGAATCGGTA
AGCTCCCTGG CCCTTGCGCG CAAAGAAACC GTAACTATTA TTCAAGAAAC CAGAAGCGGC
AAGACTACTC TGGCCACAGG TAGCCCGGTC TTTGATAAAA TCGGGAATAT ATTTCGCGTG
GTTTGCAATG TCCGGGATAT TACGGAACTC AATATGCTGA AACAGAAATT GGAACAGGTT
CAGGGATTAA GTCAGCACTA TGAAAGCCAG TTAAAAACCC TGCGAATTTA TAGTGGTACA
GATAAAATCA TAAGCAAATC TACCGAAATG AGAAAGCTTT TGGAAACGGT GGTTCGATTG
GCAGAGGTAG ACTCCACCAT TTTGATCAAT GGTGAATCAG GAACCGGCAA GGAGCTTATT
GCTGAGACCA TTCATAACCA CAGTGCTCGC GCCAAGAAAC CGTTTATTAA GGTAAACTGC
GGAGCCATCC CCGAGAACCT GATGGAATCA GAGCTTTTTG GTTATGAGTA TGGGGCTTTT
ACCGGTGCTA AAAAGGAAGG TAAAGCCGGT TATTTCGAAC TGGCCCATGA GGGAACCCTT
TTTCTGGATG AGATAGGTGA CCTGCCCTTT AATTTGCAGG TAAAACTCTT GAGAGTATTG
CAGAGCAAGG AAATAAACCG GGTGGGGGGG AGACAAGCTC TTAAAGTTGA CACCCGGATT
CTGGCTGCCA CCAACCGCAA CCTCTTGGAA ATGGTGCAGA AAAAGCAATT CAGGGAGGAT
CTTTATTATC GTCTACATGT AATTCCGGTT ATAATTCCTC CATTGAGGGA TAGAAAGGAA
GATATACCAT CGCTGATAGT GCATTTTATC GCTTTGTTTA ATCGTAAATA TAAGCTTAAC
AAGCGCATAT CCCCCGATGT AGTAGATATA TTGATGGCTT ATGACTGGCC GGGAAATGTA
CGCGAACTGG AAAACTTGAT TGAAAGGCTG GTGGTTATAT CCTCCAGTGA CATCATAAGT
CGGGATGAGC TTCCAGTTCA TTTGAGTTCG GCTGCGGTTG ATAATCCCCA GGTTAGTGTT
TCGGCAATTA TTCCACTCAA GGAAGCAGTA GAAAGTGTGG AAAGACAGCT ACTGGAAAGG
GCTTTTGCCC AGTATAGGAC TACCCGTCAA ATGGCCCAAA AACTAGAGGT GAATGCTTCC
ACCGTGGTTA GGAAGGCTGC TAAATATGGA ATATCTCCTC CGAGCCGGTA A
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| Protein sequence | MNLGEIMSPN PVLLRPEQSI RETVTLFLER NIDGAPVVDE NNQIIGLFTK THVYRAIEQE
MDMLQPIEKL MKRDIIIGHP EEEIEDVLYP GLGRLPIADE TGIMGMITRT DLARVFLESY
RNISSELDAI INSTHNMIVS VDKQSRIRVF NRAAEKLLKQ KAENVKGKLI DDVYPTSRLT
NIIKSGQVET LQKIMLNNHY FISNRSPIIK DGEIIGAVGV LQDISELEEL SRELKYVKEL
NEELDAIIES SYDGLYITDG NGMTLRLNKA FEMITGINGR EFLGRHVDDI AREGIVSESV
SSLALARKET VTIIQETRSG KTTLATGSPV FDKIGNIFRV VCNVRDITEL NMLKQKLEQV
QGLSQHYESQ LKTLRIYSGT DKIISKSTEM RKLLETVVRL AEVDSTILIN GESGTGKELI
AETIHNHSAR AKKPFIKVNC GAIPENLMES ELFGYEYGAF TGAKKEGKAG YFELAHEGTL
FLDEIGDLPF NLQVKLLRVL QSKEINRVGG RQALKVDTRI LAATNRNLLE MVQKKQFRED
LYYRLHVIPV IIPPLRDRKE DIPSLIVHFI ALFNRKYKLN KRISPDVVDI LMAYDWPGNV
RELENLIERL VVISSSDIIS RDELPVHLSS AAVDNPQVSV SAIIPLKEAV ESVERQLLER
AFAQYRTTRQ MAQKLEVNAS TVVRKAAKYG ISPPSR
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