Gene Swol_1484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1484 
Symbol 
ID4282279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1703866 
End bp1704648 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content46% 
IMG OID638138361 
Product3-hydroxybutyryl-CoA dehydratase 
Protein accessionYP_754159 
Protein GI114567005 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTTG AAAACCTGAT CCTGAAAAAA GAAGAGCGGA TTGCTCATCT GGTCATTAAC 
CGGCCCAAGG CATTAAATGC CCTCAACCAG GACACTCTTA TTGAATTAAA AACTGCAGTT
GAAGATGTCA GAGACGACCA GGATATTGAT GTGCTGATAA TAAGCGGCGC CGGAGGTAAG
GCTTTTGTAG CCGGAGCGGA TATAACTTTT ATGATGGAAA TAAACGCCCT TGAGGGCCGG
GAATTCGGGC TTTTGGGTCA AGGAGTCATG CGATTGATCG AAGCCATGGA AAAGCCAGTG
ATTGCTGCTA TTGATGGTTT TTGCCTGGGT GGTGGATGTG AATTGGCTAT GGCTTGTGAT
TTTCGTATCT GTTCCGAGAA AAGCAAATTC GGGCAGCCTG AGGTTGGCCT GGGCGTTACT
CCGGGTTTTG GCGGAACCCA GCGCCTTCCT CGCATAGTAG GTGCGGGAAT CGCCAAACAG
CTGCTTTATA CCGGCGATAT TATAAATGCG GATGAGGCTA TGCGGGTTGG ATTGGTCAAT
TATATAGTAC CATCAGAACA ATTGATGGGG AATGTGGAAA AGCTGGCGCA AAAGATTGCC
TTACGAGGCC AGAAGTCAGT CAGATTCTGC AAGATAGCGG TAAATGAAGG AATGCAGACC
GATATAGACT GGGCCATGAC CGTAGAGGCA GATCTTTTTG ACCTTTGCTT TGCCACGCAT
GTTCAAAAAG AAGGCATGCG AGCATTTGTA GAAAAACGGA AAGCCAATTT TATTGGAAAG
TAA
 
Protein sequence
MEFENLILKK EERIAHLVIN RPKALNALNQ DTLIELKTAV EDVRDDQDID VLIISGAGGK 
AFVAGADITF MMEINALEGR EFGLLGQGVM RLIEAMEKPV IAAIDGFCLG GGCELAMACD
FRICSEKSKF GQPEVGLGVT PGFGGTQRLP RIVGAGIAKQ LLYTGDIINA DEAMRVGLVN
YIVPSEQLMG NVEKLAQKIA LRGQKSVRFC KIAVNEGMQT DIDWAMTVEA DLFDLCFATH
VQKEGMRAFV EKRKANFIGK