Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1484 |
Symbol | |
ID | 4282279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 1703866 |
End bp | 1704648 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638138361 |
Product | 3-hydroxybutyryl-CoA dehydratase |
Protein accession | YP_754159 |
Protein GI | 114567005 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAATTTG AAAACCTGAT CCTGAAAAAA GAAGAGCGGA TTGCTCATCT GGTCATTAAC CGGCCCAAGG CATTAAATGC CCTCAACCAG GACACTCTTA TTGAATTAAA AACTGCAGTT GAAGATGTCA GAGACGACCA GGATATTGAT GTGCTGATAA TAAGCGGCGC CGGAGGTAAG GCTTTTGTAG CCGGAGCGGA TATAACTTTT ATGATGGAAA TAAACGCCCT TGAGGGCCGG GAATTCGGGC TTTTGGGTCA AGGAGTCATG CGATTGATCG AAGCCATGGA AAAGCCAGTG ATTGCTGCTA TTGATGGTTT TTGCCTGGGT GGTGGATGTG AATTGGCTAT GGCTTGTGAT TTTCGTATCT GTTCCGAGAA AAGCAAATTC GGGCAGCCTG AGGTTGGCCT GGGCGTTACT CCGGGTTTTG GCGGAACCCA GCGCCTTCCT CGCATAGTAG GTGCGGGAAT CGCCAAACAG CTGCTTTATA CCGGCGATAT TATAAATGCG GATGAGGCTA TGCGGGTTGG ATTGGTCAAT TATATAGTAC CATCAGAACA ATTGATGGGG AATGTGGAAA AGCTGGCGCA AAAGATTGCC TTACGAGGCC AGAAGTCAGT CAGATTCTGC AAGATAGCGG TAAATGAAGG AATGCAGACC GATATAGACT GGGCCATGAC CGTAGAGGCA GATCTTTTTG ACCTTTGCTT TGCCACGCAT GTTCAAAAAG AAGGCATGCG AGCATTTGTA GAAAAACGGA AAGCCAATTT TATTGGAAAG TAA
|
Protein sequence | MEFENLILKK EERIAHLVIN RPKALNALNQ DTLIELKTAV EDVRDDQDID VLIISGAGGK AFVAGADITF MMEINALEGR EFGLLGQGVM RLIEAMEKPV IAAIDGFCLG GGCELAMACD FRICSEKSKF GQPEVGLGVT PGFGGTQRLP RIVGAGIAKQ LLYTGDIINA DEAMRVGLVN YIVPSEQLMG NVEKLAQKIA LRGQKSVRFC KIAVNEGMQT DIDWAMTVEA DLFDLCFATH VQKEGMRAFV EKRKANFIGK
|
| |