Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1420 |
Symbol | |
ID | 4282724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 1629662 |
End bp | 1632304 |
Gene Length | 2643 bp |
Protein Length | 880 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638138300 |
Product | polyA polymerase family protein |
Protein accession | YP_754098 |
Protein GI | 114566944 |
COG category | [J] Translation, ribosomal structure and biogenesis [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase [COG0618] Exopolyphosphatase-related proteins [COG3448] CBS-domain-containing membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0185526 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAAATAA TAACATCACA TAATGCCCTG GATTTTGATG GCCTGGCGGC CATGGTGGCT GCAGGTAAGC TTTATCCAGG TGCAGTAAAG GTATTTTCTG GTACACTTTC GAAAAACATA CGGCAGTTTA TGGCCCTGTA CAAAGACCTT TTTTCTATCA AGTATCCCAA GGAAATAGAT TTAAAACAGG TTAAAAGGAT GATAGTGGTG GATACTGCCA GCGCTAATCG ATTAGGCCAC CTGAAAGAGC TGGCTTCGCA GGAAGGTATG GATTTTTATG TATATGACCA CCACCCACCA TCGCTTGATG ATTTGCCAGC CAGTATTAGT GAAGTGGAGA AAGTGGGCGC TGTCACTACT CTTCTGGTAG AAAAGATAAT GGAGCGCAAT ATCAAGCTGA GTGCCTTTGA TGCCACTATT TTAGCCCTGG GTATCTACGA AGATACCGGT AGTCTTTTAT TCAACTCCAC CACTCCCAGA GATATATCCG CAGCAGCTCA TCTCTTGAGC CGGGGAGCAA ATCTGTCGGT GGTGGCCAAC TTTATGGATC AGCCGTTTTC CGGCGAACAA AGGGAGTTGT TGCATGTCTT ACTCAATTCC TCCCAGCACT ATTTAATTAA AAATATTGAT GTAGTAATAG CACTGTGGGA CAGCAACGAA TTTATCCCTG GCTTGGATAC GGTAACTTAC CGCCTGCTGG AAATAGAAAA CTGCGATGTA GCCTTTGCTG TGGCTCTAAT GCAGGGTAAG GTAAATGTAG TCGGTCGCAG CCGAAGCAAT AATGTGAAGG TTAACGAGGT TTTAAGAAAG CTTGGCGGTA GGGGACATGA CCGGGCCGCG TCCGTAATTG TAAAGGGAAA AAGCCCCGTT GAAGTGCGGG AGATTATCAT GGCCGAATTG GGAAAAGCGG TTCAGCCTGG TTTGTTAGCC CGGGATATAA TGTCAACCCC GGTAAAAACT ATTCCCCCAA ACATAAGTAT GGAGGAGGCT GGTCGTATTA TGCTACGCTA CGGGCATACG GGAATGCCGG TAGTTGAAGG AGAAAATATG ATTGGGGTAA TATCCCGCCG GGATGTGGAC AAAGCCAAAA TTCATGAACT GGGTCACGCC CCGGTAAAAG GCTTTATGAG CAGTGGAGTT CTTTCCGTAA CTCCGGATAC CCCGGTGGGT GAAATACAAC GGATGATGGT AGAATATGAT GTGGGCAGGC TGCCGATTAC TGATAATGAT AGATTGATGG GAATAGTATC TCGTACAGAC ATATTGAGAA CTCTGCATGG TGATGATTAC CCCGAGGATC ACGAAGTCCT CTATTCTTTC ACCGGGGAGG AAAACCAGAA CTGCCTAGCC ATTATGCAGG AAAGAATGCC TTCTCGGCTT ATTGCTACAC TGCGCTTGGC CGGTGAAATA GCTGAATCTA TTGGCAGTCG GGCATATTGT GTGGGAGGTT TTGTTCGTGA CTTTTTCTTG CGTGTGCCCA ATTTTGATGT TGATCTGGTA GTGGAAGGAG ATGGGGAAGA ACTAGCCAGA AAAATGGCCC AGCATCTGGG GGGGAAAGCA AGGATTCACC AGCGCTTTCG TACGGCGGCA CTCATGCTGC CGGATGGCAC GAAAATAGAT ATAGCGACTG CTCGAACTGA ATACTACGAG TTTCCTGCTG CTCTGCCCAA GGTGGAAAAG GCTTCTATTA GGGAGGATAT GTATCGCCGC GATTTTACCA TTAATACTCT GGCTATAGCC TTGAATCCGG ATAGTTTTGG GGACCTGATT GATTATTTTG GCGGGCGAAA GGATCTGGAA AAAGGTCTCA TCCGCATTTT ATACAATTTG AGTTTTGTGG AAGACCCGAC GCGAATAATA AGAGCCATCC GTTTTGAGCA GCGTTATAAA TTTACTATTG AGGATGATAC CCTGCGCTTT GCCAAGGATG CCATAGAGCG GAGACTACTG GGTAAACTTA GCTACAAGAG GATTATACAG GAATTGATGC TCTTGCTCAG TGAGATAGAC CCCCTTCCGG CCCTGGATCG TATTATGGAA ATCGGGGTAT GGGAGTATAT GATTCCGGAA ATAGACCTTA ATAAAGTAAG CCGGACCATG ATTAAGAGAA CCCCCATCAT TATCACTTGG TGGGAGGAAC GTTATTACGG GAAAAACATT AAGGGTTGGC TGGTTTATTT TATGCTTTTG TTGGCAGGCT TGGATGAAGA ACTGGTAATC CAAATCATTA AACGCTACCA TTTGGACAAT TATGCCCGTA AAGCCATACA GGAGTCCCGG CAAGTACCGC AGATAGTGGA ATATCTGTGG GAAAGTCGTG AAATTTTACC GGGTGAAATG GATCAAAGGC TGGATGGCTG GAGCAATGAA AGTATGGTTC TCTTGCTCCT ATCCATCAAG GATGAACTGC TTTGGGAAAA GCTTGTTAAC TACCTCGACC TCAAGGAGCA GGTAAAAGTA GAGATTAACG GCTTTGACCT TAAGGAGATG GGACTAAAAC AAGGGCCTGA GTTCCGCTTC ATTTTTGATG AATTATACCG GCAGAAACTC AATGGAATAA TTAAGAACCG CGAGGAAGAG CTGCAAATGG TGAAAAAATG GATATCGGAA GGGAAGTTTA ATAATGATCC AGTCGCTGAG TGA
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Protein sequence | MEIITSHNAL DFDGLAAMVA AGKLYPGAVK VFSGTLSKNI RQFMALYKDL FSIKYPKEID LKQVKRMIVV DTASANRLGH LKELASQEGM DFYVYDHHPP SLDDLPASIS EVEKVGAVTT LLVEKIMERN IKLSAFDATI LALGIYEDTG SLLFNSTTPR DISAAAHLLS RGANLSVVAN FMDQPFSGEQ RELLHVLLNS SQHYLIKNID VVIALWDSNE FIPGLDTVTY RLLEIENCDV AFAVALMQGK VNVVGRSRSN NVKVNEVLRK LGGRGHDRAA SVIVKGKSPV EVREIIMAEL GKAVQPGLLA RDIMSTPVKT IPPNISMEEA GRIMLRYGHT GMPVVEGENM IGVISRRDVD KAKIHELGHA PVKGFMSSGV LSVTPDTPVG EIQRMMVEYD VGRLPITDND RLMGIVSRTD ILRTLHGDDY PEDHEVLYSF TGEENQNCLA IMQERMPSRL IATLRLAGEI AESIGSRAYC VGGFVRDFFL RVPNFDVDLV VEGDGEELAR KMAQHLGGKA RIHQRFRTAA LMLPDGTKID IATARTEYYE FPAALPKVEK ASIREDMYRR DFTINTLAIA LNPDSFGDLI DYFGGRKDLE KGLIRILYNL SFVEDPTRII RAIRFEQRYK FTIEDDTLRF AKDAIERRLL GKLSYKRIIQ ELMLLLSEID PLPALDRIME IGVWEYMIPE IDLNKVSRTM IKRTPIIITW WEERYYGKNI KGWLVYFMLL LAGLDEELVI QIIKRYHLDN YARKAIQESR QVPQIVEYLW ESREILPGEM DQRLDGWSNE SMVLLLLSIK DELLWEKLVN YLDLKEQVKV EINGFDLKEM GLKQGPEFRF IFDELYRQKL NGIIKNREEE LQMVKKWISE GKFNNDPVAE
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