| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1388 |
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| Symbol | |
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| ID | 4282623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 1607389 |
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| End bp | 1608216 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638138268 |
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| Product | 3-deoxy-7-phosphoheptulonate synthase |
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| Protein accession | YP_754066 |
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| Protein GI | 114566912 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2876] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR01361] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000840325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCAT TTAAACTGGC TTCATGGGAC AGAAAAGGAA GCTATACCCA TATTAAAATA
GATAGTGGAG CAGAACCTTT ACTAATCGGT GAGGGGTATT GTACGATAAT TGCCGGACCC
TGTGCGGTGG AAAGCGAAGA AGGCTACTTG CAGATTGCTC GCTTTCTCCA GGAGGCTGGT
GCTCACGCCT TGCGCGGAGG TTTGTTTAAA CCTCGCACCT CCCCATATTC CTTTAAGGGC
TTGGGCCGGG AAGGTCTGGA AATAATGCTG GAAGCCCGCC GTATTACGGG GCTGCCTCTA
GTGACAGAGA TAATGGATGT CCGGGATTTG GAGCTTCTTG GTGATAATAT TGATATTTTG
CAGGTGGGGA GCAGAAACAT GCAAAACTAT TCCCTGCTAG AAGAGCTGGG AAAATTGCAT
AAGCCTATAC TGCTAAAACG CGGATTGTCT GCGACTATAG AAGAGTGGCT CCTGGCGGCG
GAATATGTTT TGGATGGGGG AAACCCCCAT GTAATTTTGT GTGAACGCGG AATCAGAACC
TTTGAAAGCT ATTTACGCAA TACCGTTGAC ATAGGGGCTG TGGCCCTGCT CAAGGAGCTT
TCCCATTTGC CCGTGATTGT GGATCCCAGT CATGCTACCG GGAAATGGAA AATGGTTACT
CCCGTGGCCC GCGCAGCCAT AGCCGCGGGG GCGGATGGTT TGATGGTAGA AGTGCACCCG
GATCCAGACC GGGCTCTTTC CGATGGCAAA CAGTCTTTGA CCCCGGAAAA TTTCCTGAAG
ATGTATGAAC AGGTAAGCCG GATTTCTCGG CTGGTAAAAA ATCTTTAA
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| Protein sequence | MKPFKLASWD RKGSYTHIKI DSGAEPLLIG EGYCTIIAGP CAVESEEGYL QIARFLQEAG
AHALRGGLFK PRTSPYSFKG LGREGLEIML EARRITGLPL VTEIMDVRDL ELLGDNIDIL
QVGSRNMQNY SLLEELGKLH KPILLKRGLS ATIEEWLLAA EYVLDGGNPH VILCERGIRT
FESYLRNTVD IGAVALLKEL SHLPVIVDPS HATGKWKMVT PVARAAIAAG ADGLMVEVHP
DPDRALSDGK QSLTPENFLK MYEQVSRISR LVKNL
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