| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1328 |
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| Symbol | |
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| ID | 4281908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 1537132 |
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| End bp | 1539423 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638138209 |
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| Product | Signal transduction histidine kinase-like protein |
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| Protein accession | YP_754007 |
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| Protein GI | 114566853 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGGAAG CAGAAAAACA TGAATATGCG AAAACCATAA GCAGGATTCT GGAGGAAAGA
GATCATTTAC AGATTATCCT GGAGAGTATA GGTGATGGTA TCATAACTAC TGATATGGAG
GGTAATATAA GTATGATGAA TCCGGTGGCG GAAAAACTGA CCGGTTGGAG TCGGGAGGAA
GCCCTGGGAA AACACCTGTA TGAGGTTTTC AGGATTATTG ATAATACGAG CAAACAGCCG
TTGGAGAACC CTTTTGATAA TGTCTTTACT CGAGGTTTGA GCCAGGGCCT ACTTAGAAAT
TCTGCATTGC TCGACCGTGA TGGAGAAACG CGATTTGCTT CTGCCTGTGC TTCGCCTATT
ATAGATAAGA ATCAGAAAAG GGCGGGCATG GTAGTGGTAT TTCGCGATAT TGACCGGATT
AAGAAAAACG AGGACGAGAT TCGTTGCCTG TCCTGGGTTT TGCAGCTTAG CTCCAATGCC
ATAATTATCT TTGATATCCA GGGCATAGTC CAGTTCATAA ACAGCCGTTT CACCCAGTTG
ACTGGCTATG AAGCATATGA AGTAGTTAAC CGGAATTTGA GACTTATCAA TAACCTGCCA
TTAGATGTTG AAAAAATATT TGCCCGGTTG CGGGCAGGTG AAGAGTGGCA TGATGAAGTT
TTTTTCCACA ACCGCCAGCT GGAACCCTGC TGGTGGTCAA TATACTGTAC TGCGGTCAGA
GACGAGGAAG ATAAGATAAC AAGTTATTGT AGTATTATTC AAGATATAAG CGAGCATAAG
CAAGCTGAAG AAAACTTGAA AAAGGCCAAG GAAGCGGCGG AGGTGGCCAA TCGCGCCAAG
GCCGAATTTT TAGCCAACAT GAGCCACGAA ATTAGAACTC CCCTGAACGC TATTATTGGC
ATGACCAGTT TGAGCCTTTT ATCTAATCCT GAACCAGATC AGAAAGAAAA CCTGGAAATT
ATCAAAATGG CCGGTGATAC TCTATTAAGT ATTATTGATA ATATTCTAGA CTTTTCTAAA
ATTGAAGCCG GCAAATTGAC TGTTGAAAAA ATTAATTTCA ACCTGCATGA ACTGATTGAG
AAGAACATTA CCATACATAA AGCACGAGCA CAGGAAAAAG GTCTGCTTTT GCTCTATTAC
ATAGATCCCG CCATACCAGT CCAGGTAAAC GGAGATCCCT ATCGTCTGCA ACAGGTTTTT
AACAACCTGA TCGGCAACGC CATCAAGTTT ACTGACCATG GAGAAGTTGA GGTGCGTTTA
AAACTGCTGG ATATATTTGA TGATCATATT GTTTTACAAG CATCGGTGGC CGATACCGGA
AGAGGTATAA CCGCTGGCCA GCAAGAAAAG ATGTTTGAAA GTTTTTACCA GGGGGATAGT
TCAATAAGCC GTACTTATGG GGGTACCGGC CTGGGCCTTA ATATCTCCAA AAAAATTGTG
GAAATGATGC AAGGCAAGAT TTGGCTGGAA AGCGATATCG AGTCAGGCAG CACCTTTTAT
TTTACGGTTG AATTGGGAAT CCCGGAATCG TCTAAACTGG AGGCTGAATC AAACCAAGCA
ATTAATCAAA AAGCTGATAC CGAAAAAAAC CCATCCCTGT TCATACTGGT GGTTGAGGAC
AACGAAGTAA ACCAAATGGT GCTCTCTAAC TTGCTCCGCT CTCAGGGTCA TCAGGTGGAG
GTGGCTGCCA ATGGGGTCGA AGCCCTGGAG CTGCTGGATA AAAATAACTA TGACCTGGTT
TTTATGGATA TATTAATGCC GGTAATGGAT GGACTGGAGA CAACCCGCCG TATTCGTGAA
CAGGAAGAAA TAACTGGATT CCATATTCCC ATTATCGCTA TAACCGCTCA TGCTATACAT
GGCGACCGGG AGAAATTCCT GGCTGCGGGT ATGGATGATT ACCTCGCCAA ACCGGTTCAA
ATGGAAGAAC TTAACCAGGC CATAAGCAAA ATAATTAAAA AGGCCAGGTC AACGACAACA
ACCATCAATC ATTTGGATAT AGAACCCTTA AGCCCCAAAG ATCTTTTTTT TAAGGTTGAC
AGCAGCTTTT TGGATCAGGT TGAGAAAGCT ATTTTGAAAC TCGATCTGGC ATTATTGAGC
CTTGATTTGC AGCAGGTGGA AAAGTGGGCT CATGAGACAA AGGAACTGGC CTACCAAATG
GATGAGATTA CTATTAAGAA CCTGGCTTTT AAGATAGAAC TTGGTGCCCG CAAAGGGGAT
CTGGATCAAT GCTGGAGTCT CTTGCAGAAA CTGCAGGAAA TATATGATTA TCTTTCTTCT
ATGGGATCTT GA
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| Protein sequence | MLEAEKHEYA KTISRILEER DHLQIILESI GDGIITTDME GNISMMNPVA EKLTGWSREE
ALGKHLYEVF RIIDNTSKQP LENPFDNVFT RGLSQGLLRN SALLDRDGET RFASACASPI
IDKNQKRAGM VVVFRDIDRI KKNEDEIRCL SWVLQLSSNA IIIFDIQGIV QFINSRFTQL
TGYEAYEVVN RNLRLINNLP LDVEKIFARL RAGEEWHDEV FFHNRQLEPC WWSIYCTAVR
DEEDKITSYC SIIQDISEHK QAEENLKKAK EAAEVANRAK AEFLANMSHE IRTPLNAIIG
MTSLSLLSNP EPDQKENLEI IKMAGDTLLS IIDNILDFSK IEAGKLTVEK INFNLHELIE
KNITIHKARA QEKGLLLLYY IDPAIPVQVN GDPYRLQQVF NNLIGNAIKF TDHGEVEVRL
KLLDIFDDHI VLQASVADTG RGITAGQQEK MFESFYQGDS SISRTYGGTG LGLNISKKIV
EMMQGKIWLE SDIESGSTFY FTVELGIPES SKLEAESNQA INQKADTEKN PSLFILVVED
NEVNQMVLSN LLRSQGHQVE VAANGVEALE LLDKNNYDLV FMDILMPVMD GLETTRRIRE
QEEITGFHIP IIAITAHAIH GDREKFLAAG MDDYLAKPVQ MEELNQAISK IIKKARSTTT
TINHLDIEPL SPKDLFFKVD SSFLDQVEKA ILKLDLALLS LDLQQVEKWA HETKELAYQM
DEITIKNLAF KIELGARKGD LDQCWSLLQK LQEIYDYLSS MGS
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