Gene Swol_1309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1309 
Symbol 
ID4282249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1510238 
End bp1511563 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content31% 
IMG OID638138189 
Producthypothetical protein 
Protein accessionYP_753988 
Protein GI114566834 
COG category 
COG ID 
TIGRFAM ID[TIGR01538] phage portal protein, SPP1 family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.370467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATTTAC AAGATTATGT AAATAAGTAT TATGATAGTG ATGACAAATG GTTTATGCAA 
TTTACTTCAG AATATGGTAA TTGGGAACGG ATAGCAAATA TTATTAATAT TAAAGAATAC
TTGAACGGCA AACACGCTAT TTTAAATAGA GGTGTGGAGA TGTGGAACGG TAAGGAGTTT
CATCCTAGAA CAATAGTTTT AAATTATGCT AAAACGATAT TGAATTTTAG TACAAGTTAT
TTGCTGAAAA ATCCGGTAAC TATATCAGGT GATGAAGAAT CTGTATCTAT TATGAAAGAA
ATTTATAAAA AAGGAAATTA TAATAAAATA GATTGGGATA TATTAGATAA AGTATGTAAG
TACGGTAGTA TTGCTGAATA CGTTTACATT GATAAGAACG GGGAAATACA GAGTAAGTTG
ATTAATCCTG AAGATAGTTT TCCAGTTTAT AATGATGAAA ATGAATATAT CGGATTTGTA
GAGCATTATA CTTCAATTAA TGGAATAAGT TACTGGAATG TATTTGATGA GAATACAGTC
AAAAAATATG ATGATTTTGG CGGAGAAGTG ACATTCAGAG GGGAATTTCA TAATCCTAGT
GGATTACCGA TTATTTATAA GAATAAAAAT GAAATGGACG AAACAGCAGG TAGAAGTGAT
TTGGAGGATT ATGTAAATAT TATTGATAAC CTGGAAGATT TGATTAGTAA ATACACTGAT
AGTATTTATA AATTCGTGAA TCCTATTCCA GTAGTGGTAG GCCAGAAATT AGGTATTGGT
AAAAACGGAG AAGGTGCTAT TCCTGCTAAT CTTGTGGGAA GTGGTATTAA TTTAGATGAT
GGTGGTTCTT TTGGATTTGC TAATGGACAA TTGGATTATA AGAGTTTTGA AAGCGTATGG
AAAATTCTTT ATAATAGTTT ATTGCAAATA TCAAGTGTCC CTGCGGTAAG TATGGGGGTA
CAAGATGTAA GTAATTTAAG TGAGGTAAGT ATTAAATTAA TGTTTTCTTT GGCTGATCTT
AGAGCAGGTA TGAATGAAAT GTATATGAGA GAAGGAATGG AGTTTAGATT TAAGGCGATT
GAATCATTAC TTAAAGCAAA AGGTATAGTG ATTAATTCTG ATGCTTTAGA CGTTGTATTT
GAGTACAGTA GGCCAATGAA TAGAACAGAT ATTATTAATG ATTTAGAAAC TTTAAGGGGA
ATAGGTGCTA TTAGTTTACA GAGTACATTG GAACAGTGTC CTATGGTTTA TGATGTGGCA
ACAGAATTAG ATAGAATTAA AGCAGAAGGT AGTAATGTTG GTAGTGAGGA TGATAATGGG
GAATAG
 
Protein sequence
MNLQDYVNKY YDSDDKWFMQ FTSEYGNWER IANIINIKEY LNGKHAILNR GVEMWNGKEF 
HPRTIVLNYA KTILNFSTSY LLKNPVTISG DEESVSIMKE IYKKGNYNKI DWDILDKVCK
YGSIAEYVYI DKNGEIQSKL INPEDSFPVY NDENEYIGFV EHYTSINGIS YWNVFDENTV
KKYDDFGGEV TFRGEFHNPS GLPIIYKNKN EMDETAGRSD LEDYVNIIDN LEDLISKYTD
SIYKFVNPIP VVVGQKLGIG KNGEGAIPAN LVGSGINLDD GGSFGFANGQ LDYKSFESVW
KILYNSLLQI SSVPAVSMGV QDVSNLSEVS IKLMFSLADL RAGMNEMYMR EGMEFRFKAI
ESLLKAKGIV INSDALDVVF EYSRPMNRTD IINDLETLRG IGAISLQSTL EQCPMVYDVA
TELDRIKAEG SNVGSEDDNG E