Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1278 |
Symbol | |
ID | 4282001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 1475968 |
End bp | 1476687 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638138153 |
Product | orotidine-5'-phosphate decarboxylase |
Protein accession | YP_753958 |
Protein GI | 114566804 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAGGCCC AAGAGAGAAT TATATTAGCC CTGGATGTTG GTAGCCGGGA GCAAGCCCTG GCATTGGTTA AGGATTTGGC TCCTCATGTG GGGGCATTTA AAGTTGGGAT GCAGTTGTTC AATAGCTGCG GCCCCAGTAT AGTAGAAGAG ATTAATCAAT TGGGGGGACG GGTATTTTTA GATCTGAAGT TCCACGATAT TCCTAATACC GTAGCTGCTG CCGGCAGGGT AATAACCCGT TTGAATTGCT TCATGTTTAA TGTTCACGCC GCCGGAGGCC GGGAAATGAT GCGCCAGGTA GTAGAAGAGG TGAAAAATGA GGCCAAAAAA CTAGCGGTGG CAGCACCCTT ATCCCTGGCT GTAACGGTGC TTACCAGTAT ATCGCAGGAG CAACTGGAAG AAGAGATTGG GGTTAAAGGA ATGAAGCTTA AAGACCTGGT GGTCAAGTGG GCTCTTATGG CTAAAGAATG TGGAATCTCT GGTGTTGTTT CATCTCCGCA AGAAATCGAG GCTATACGGG CAGCCTGTGG CCCTGAATTT AAAATCGTCA CCCCGGGTAT CCGACCCGCC TGGTCGGAGA AAAATGACCA GAAACGGATT ACCACGCCAG GTCAGGCCTT GCAGATGGGG GCTGATTTTA TGGTCATCGG ACGGCCTATT ACTCAGGCAG CGAACCCGGT GGAAGCGGCT TTAAAGATTA TAGGCGAATT GGAGGAATAA
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Protein sequence | MQAQERIILA LDVGSREQAL ALVKDLAPHV GAFKVGMQLF NSCGPSIVEE INQLGGRVFL DLKFHDIPNT VAAAGRVITR LNCFMFNVHA AGGREMMRQV VEEVKNEAKK LAVAAPLSLA VTVLTSISQE QLEEEIGVKG MKLKDLVVKW ALMAKECGIS GVVSSPQEIE AIRAACGPEF KIVTPGIRPA WSEKNDQKRI TTPGQALQMG ADFMVIGRPI TQAANPVEAA LKIIGELEE
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