Gene Swol_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1260 
Symbol 
ID4282107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1452893 
End bp1456447 
Gene Length3555 bp 
Protein Length1184 aa 
Translation table11 
GC content50% 
IMG OID638138135 
Producthypothetical protein 
Protein accessionYP_753940 
Protein GI114566786 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGAAAA AAAGAAGAAA AATACTCGCA TACGGCATAT TAGTGCTTTT TATGTTGTCC 
ATAAGCGGAG TCGCCTGGGC AGCACCGGCA GATACAACAA GCACCGGGGG AAATAGTATT
GAGGCGCAGA CGCTTTCGTC ATTCAAGGAT GTAAGCACCG CGGACGGCAA CCTGATCTAT
ATCAACTTCC TGGCCAAGAA AGCGATCATC GCTGGTTTTC CCGATGGCGG GTTTCACCCA
AGCGAGGGAT TGAGCCGTGC CCAGGCAGCA ACGGTAATTG TAAAAGCTGC CGGCTTAAAT
AGTGATAATA AGGAAACATT GTTTAAAGAT GTGAGCGAAG GGCACTGGGC CGCCGCTTAC
ATAACCGCAG CCGCGAAGGA TGGTTACCTG AAAGGCTATC CCGATGGGAG CTACAGACCC
GAGGACAAGC TTAGCCGAGC TGAGGGTATA AACCTAATAT TAAGACTATC CAAGCAAAAA
GATAATGCGG AATTGCCCGT ATTAAAGGAC CTGGATAGCA AGCACTGGGC CGCCAATTCG
GCAGCAATCG GACTGGCGGC TGGAATGGTG GGCTTGAGCA GTGACCAGAC TCAATTCCTT
CCCGATGCCG ATTTCAGTCG CGGCGATTTA AGCCGGGCTT TGGCCGTATT GCTTACTACT
GACCCGGATT TAAGCAGAAA AGCATTAAAT GGCAGCCTGG AAATAATAAA TGGCCAAGTG
AAGATTAACG GCCAAACCGT AAGTGGTACC GTAAGCATAC AAAACGGCGA TATAATAGCA
ACCTCCGCCG GTGCCGAAGC CCAGTTGAAC TATCCTGACG GTAGTGGTTT TCTAATCAAG
GGAAATACTG GTTTTACAGT TAAGGAAACC CAGGGCCGGG AATATATCAA GAAGGACGGC
AGCCCGGGGA TCGCAGTGGA CTGGCTGCTG GTTGACCTTA AAAAAGGCAA TGTCTTCGGA
GCCCTGGCCG ATAATCCCAA TGTACAGAAA GTTGCGGAAA AGAAAAACGC TGCTGCAGGT
GAACATCTGC TGGCCGGCCT TTCCAATGGC CTGGAATTGA TAGCGGCAAA CGATAAAGGG
CTGCCCTGGT ATAAAACCGC CAACAGTAAA AAGGTAAAAG TAAAAGTGGA TATGCCTTAT
GGCGTAGTCG CAGTACGCGG CAGCTTCTGG AACAATAGTG TAAGTGATGA CGGCTGCAAC
ACTTCGCTTT TGGAAGGCGA ACTCGATTTA ATTGCCGGTG GCCAGACCCA GTCCCTGCTT
CCCGGTCAGA GTTCCGGTGC GAGCTCGTCC AATCCCCTGC CTGCTCCTCC AACACCGATG
ACTGCAGCGC AAGTAAACGC CTGGGTGCAG CAAGCTAGCT GGCTGCAGAA TGTGGCGCAA
ACCATGCAGA CCCAGCAGGC GGCATGGCAG GCTCCTCCGG GAATTACTCA ACCCAACCAG
CCGCCGCCAG CAATCCCTAA GCCTACGCTA CCCAGTATAT TGAATGTCCT TAACCAGGCT
TTGATAAAGG TTCAGCAGGC AGCTGGAATT ACCAACCCTG TGCAATTGAA TGTTGCTGCT
TCCAGCAGCA GCAGTTACAA CACCGGTGGT TCCAGCAGCA GCGATTACAA TAGCGGAGGC
GGCGGTGGAG GCAGCCAACA GCCTGGGACC TGGCGGCTGG AAGATGTGGC CACCACGGTT
TATAATAACC AGACCCTTGT TCTGACCCGT AAACTCCATA TTACCCCTCC CGTCGGAGTG
CCGCAGGATT CATATTATGA AGTGAAGATG AAAAGCGGAG GCACAATTTA CAGCCTTGGA
ACAAACAAGA TTGGCAATCC CATCTTCCAT TTAGCCAAGG CCTCGGATGA TCCCTCCCGT
CTTATTGCGG CTTTCCAGGA TAACAGCGGT AACAGTTATG GCTTTTTCAG CCTGAACGGC
AGCGGCAGCA GCGGCACCCT GACCAGCCTG GCGACCAGGA CTATCTCTGG AAAAATTGAA
CTGCAATCAT CTTCCGGACC CATAGCGGCT CCCGCCGGAG GTTTAATCAT TAGAATATAT
ATTTCGGGCA ACACTGTAGG TGGCCATTAT AGCAGCAACC AATCAGTTAC TATGCCGGCC
GGCGCGTCCA GCGTGAATTA TACTCTAAAT GTTCCCGAGA ACAAGAGCAA CTCTGGTTAC
TATATCTCCT GCGATGTAGT GGACAAAAGC TACAGCAATC CCTTTTTTAG TACCAGAATC
TTCGATGTGG ATGTTTCGAA GGGCAACGCC AGCGTTGAAA ATATAATACT GCAGCCGGCT
GCCTATATTC ATGGAAAAAT AAGCCTGCCC GAGGTAAATA CCTCAAATAT ACCTGTTTCC
GGCAGCATAG CAGCCAAACC GGCATCGGAG TCGGGTGGTT CTTCTTTCAT AACTCACAGA
ATTAATTTTG AAATAGAGAA AAACAAAAAG GATTTTGCTT TTCACCTGCT GGTAGAGCCT
GGAGCAGATT ATTATTTGTA TTATGAATTG TATAACAGCA ATAATGAATA CGAACATTCG
CAGAAATTTT ATCGCTTTGG TTATTACAGC AGCTCAGGCA CCGTTGGCAG CGTTCCTGTT
GAAGATATCT ACACTTCTCT CGTTGGAGCA ACCGCTATTA CCGTAAACAG CTGTATCTCT
GACATCAACC TGGATGTTAA GACCGGTTAC GGCTATCTCA TTTCCGGTTA CATTACATTG
CCGGAAGCTG CTCCGAGCAG CGGTATCAAC CTTTGGCTCT GGGTCCATCC GCAGTCTGGG
CCGAACGCCG GTATCTCCGC CGGTATCTAC AAATATTTTT TACACGAAGA AAAATCGCAA
CCTTATTACC TAAATGTACC GGGCCCAGGC AACTATATCC TGTCGGATGA TCGTGGTACA
TCGGCATTTA CCAACCCGCC GTTCTACAGG CTGGATCCGG TGGCGGTGAC GGTCTATTCA
GCCGATGTCT CCCAGGATTT AAACCTTGTA AGCTCAGGCA TAATACCGGG TGGACCGGGC
GGCGACATCA CCGGGCTTGA TCCCGCTATG GTAAGCGGCC CGGCCCTCCT AGTGAAAGGA
AAGGTCTATG GACTGCTCAG TCCCTCCTGT ACGGCAGAAG TTGCGGCCTT GATAAGATTA
AACGAGTGCT GCTATTTTAA GTCAGCGGAC GGGCAGTGGT ATGAACTGAT TGACAGCGGC
AACGGTTTAA TTGCAACAGA TGCATCGGCT ATACCTCCGA TAGGAAAGAT CATCGACTGC
CCTGTATTAA CAGCATCGCC AGCCTCCTTA TTGCAAGACG ACACCGGACG CAGCATTAAG
GTAAGTGCAA CATCAGGCAG TGCTCTCTGG ACAGCAAGTG ATGACAGTGT ACGGGCTATT
CTAACAAATG ATCGAGAAGG GCTAATCATA TCGTGCAGTC CTATTAAACC TGACACTATT
GGAGATGAAA ACGCTACCAT CCCCATACCC GATGCTATAC CCAGAAGTAA ATATATTCTG
ACCTTGTACA AGGAATCCGG TGGAGCTAAA ATACTGCTGG GCGCAGCCAA GTTTACTATC
ACTAACCCAA TTTAA
 
Protein sequence
MKKKRRKILA YGILVLFMLS ISGVAWAAPA DTTSTGGNSI EAQTLSSFKD VSTADGNLIY 
INFLAKKAII AGFPDGGFHP SEGLSRAQAA TVIVKAAGLN SDNKETLFKD VSEGHWAAAY
ITAAAKDGYL KGYPDGSYRP EDKLSRAEGI NLILRLSKQK DNAELPVLKD LDSKHWAANS
AAIGLAAGMV GLSSDQTQFL PDADFSRGDL SRALAVLLTT DPDLSRKALN GSLEIINGQV
KINGQTVSGT VSIQNGDIIA TSAGAEAQLN YPDGSGFLIK GNTGFTVKET QGREYIKKDG
SPGIAVDWLL VDLKKGNVFG ALADNPNVQK VAEKKNAAAG EHLLAGLSNG LELIAANDKG
LPWYKTANSK KVKVKVDMPY GVVAVRGSFW NNSVSDDGCN TSLLEGELDL IAGGQTQSLL
PGQSSGASSS NPLPAPPTPM TAAQVNAWVQ QASWLQNVAQ TMQTQQAAWQ APPGITQPNQ
PPPAIPKPTL PSILNVLNQA LIKVQQAAGI TNPVQLNVAA SSSSSYNTGG SSSSDYNSGG
GGGGSQQPGT WRLEDVATTV YNNQTLVLTR KLHITPPVGV PQDSYYEVKM KSGGTIYSLG
TNKIGNPIFH LAKASDDPSR LIAAFQDNSG NSYGFFSLNG SGSSGTLTSL ATRTISGKIE
LQSSSGPIAA PAGGLIIRIY ISGNTVGGHY SSNQSVTMPA GASSVNYTLN VPENKSNSGY
YISCDVVDKS YSNPFFSTRI FDVDVSKGNA SVENIILQPA AYIHGKISLP EVNTSNIPVS
GSIAAKPASE SGGSSFITHR INFEIEKNKK DFAFHLLVEP GADYYLYYEL YNSNNEYEHS
QKFYRFGYYS SSGTVGSVPV EDIYTSLVGA TAITVNSCIS DINLDVKTGY GYLISGYITL
PEAAPSSGIN LWLWVHPQSG PNAGISAGIY KYFLHEEKSQ PYYLNVPGPG NYILSDDRGT
SAFTNPPFYR LDPVAVTVYS ADVSQDLNLV SSGIIPGGPG GDITGLDPAM VSGPALLVKG
KVYGLLSPSC TAEVAALIRL NECCYFKSAD GQWYELIDSG NGLIATDASA IPPIGKIIDC
PVLTASPASL LQDDTGRSIK VSATSGSALW TASDDSVRAI LTNDREGLII SCSPIKPDTI
GDENATIPIP DAIPRSKYIL TLYKESGGAK ILLGAAKFTI TNPI