Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1253 |
Symbol | |
ID | 4282100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 1443157 |
End bp | 1444605 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638138128 |
Product | hypothetical protein |
Protein accession | YP_753933 |
Protein GI | 114566779 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAAGG AAGGGCTGAA CCATAGGAGG TGTGGGTCAA CGAAAGTTAC TGAAAGTGAC AACTTAAAAC ACAGACAACT TCGAGAAGAA GGCTATCTGC AAAGGGTATC TGCGGAACAG AGAGAGTATG CAGAAGCGTG CGCGTCACCG AAGATGACTG AAACCGACAG CACCAACACA AACGAGCAGA CGGAAGGATT GCTGGAGCAA ATTCTAAGCA GAGATAATCT GAATCGTGCC TACAAGCAGG TAAAGAGAAA CAAAGGTGCG GGTGGAATTG ACGGAATGCA GGTAGATGAA CTTCTACCCT TCCTGAAAGA AAACAAGAAC GAACTTGTGC AATCCCTCCG GGACGGCAAA TACCGTCCTA AACCCGTACG CAGGGTAGAA ATACCCAAAG AGAACGGGAA GACCAGAAAG CTGGGGATAC CAACTGTCGT GGACAGGCTA ATCCAACAAG CGATTTGCCA AGTCTTGAGC CTAATCTTTG AGAAACAGTT TTCAAACAAT AGCTTTGGAT TCCGACCGAA AAGGAGTGCA CATGATGCAC TTAAAAGATG CCAGACCAAC ATTACAGATG GCTACAGATA CGTAGTCGAT ATGGATTTGG AAAAGTACTT TGACACGGTC AACCAGAGCA AACTCATTCA GATACTATCG GAAACGATAA AAGATGGACG AGTCATTGCG CTGATTCACA AATTCCTGCG AGCGGGAGTT ATGGTAGGCG GAATGTTTGA AGACAGCCCC GAAGGAGTGC CGCAAGGCGG ACCCCTGAGT CCACTGCTGG GAAACATCAT GCTGAATGAA TGTGACCATG AACTGGAAAG GCGCGGACAC CGCTTTGTAC GCTATGCAGA TGATATGATG ATTTTCTGCA AAAGCAAGAA AGCGGCCAAT CGTACGCTAA ACCACATCCT CCCATACATC GAAGAGAAAT TATTCTTGAG GGTGAATCGG GATAAAACAC AGGTAGCACA CGTGAACAAG GTCAAATTTC TGGGTTATGG TTTCTACATC CATAAAGGAG AAGGGAGGCT CAGGATACAT CCCAAGAGCG TCCAAAAATT TAAGGAAAAA ATCCGGGAAG TCACAGGACG TAGTAACGGG ATGGGGATTG AGTCAAGGAA AATCCGATTG AACCAAGTGG TTCGAGGATG GATGAATTAC TTCAAACTGG TAGATGCAAA GAACCTCATA CAGGGATTGG ATGAGTGGAT AAGAAGTCGC ATTCGGATGG TTACATGGAA ACGATGGAAG AAAGTCCGTA CACGTTCTGA AAATCTCAAA CACCTGGGAA TTAAGGAAGA ACGGGCATGG ATGTGGGCGA ATACAAGAAA AGGCTACTGG CGTACCGCCC ATAGTCCAAT CTTATTAATA GCCCTATCCA ACGAGAGGTT CAAACGTGCC GGATACCTCA GTTTGATGGA ATGCTACTCT GCGAAGTAG
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Protein sequence | MPKEGLNHRR CGSTKVTESD NLKHRQLREE GYLQRVSAEQ REYAEACASP KMTETDSTNT NEQTEGLLEQ ILSRDNLNRA YKQVKRNKGA GGIDGMQVDE LLPFLKENKN ELVQSLRDGK YRPKPVRRVE IPKENGKTRK LGIPTVVDRL IQQAICQVLS LIFEKQFSNN SFGFRPKRSA HDALKRCQTN ITDGYRYVVD MDLEKYFDTV NQSKLIQILS ETIKDGRVIA LIHKFLRAGV MVGGMFEDSP EGVPQGGPLS PLLGNIMLNE CDHELERRGH RFVRYADDMM IFCKSKKAAN RTLNHILPYI EEKLFLRVNR DKTQVAHVNK VKFLGYGFYI HKGEGRLRIH PKSVQKFKEK IREVTGRSNG MGIESRKIRL NQVVRGWMNY FKLVDAKNLI QGLDEWIRSR IRMVTWKRWK KVRTRSENLK HLGIKEERAW MWANTRKGYW RTAHSPILLI ALSNERFKRA GYLSLMECYS AK
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