| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1228 |
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| Symbol | |
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| ID | 4282143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 1419590 |
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| End bp | 1420960 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638138103 |
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| Product | hypothetical protein |
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| Protein accession | YP_753908 |
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| Protein GI | 114566754 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases
[COG0781] Transcription termination factor |
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| TIGRFAM ID | [TIGR00446] NOL1/NOP2/sun family putative RNA methylase
[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.13972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCAATAA AGAAAGACAA AGCAGTTAAT AAAGCCCGAA TAATGGCCGC GGAAATAGTT
TATGAAGTAA TGGAAAGGGG GGCTTTTGCC AACCTGGCCC TGGCTAAAGC TCTCCGTAAC
TCTGATTTAT CGGCAGCAGA CCGGCACCTG CTTACCGAGA TTGTAAACGG GACGGTTCGT
ATGATTAAGC ACCTTGATTG GGTGCTTGAA TTATTTTTGC ACTCGCCCAT TAAGAAACAA
AATCCCTACT TGCTAAGTAT CCTCCGTACG GCTCTCTACC AGTTAATGTT CCTGGCCAAG
GTGCCTGATT ATGCTCTGGT CAATGATGCC GTGGAAATAA GCCGTCAAAA GATGGGGGCT
AAAATGGCCG GGGTTAGCAA TGCAGTATTA CGAAACATAA TCAGAAAGCT GGACAAAATC
AAGTACCCGG ATGATCCCGT TAGCTTCTAT TCCATATATT ATTCCCATCC GGATTGGCTG
GTCAAGCTGT GGCTGGATAC ATTGGGAACG CAGGCCTGCG AAACCCTCTT GGCCTATAAC
AACAGTCGTT CGCGGGTGGT TTTACGCTGT AACCCCTTAA AGTGCAGCCG GGAGGAGCTT
ATAGATAAAT TGGAGGAAGA AGGGGTTAAA GCCCAGCTCA GTCCCTTGAC TCCCTGGGGA
ATAGTAGTGG AAGATAACCC ACAACCTATA GCCGAAACGG CATCTTTTAA AAAAGGGTAT
TTTTATATAC AAAATGAGGC TTCCATGCTG GCAGCAGCCA TTTTAAATCC ACCGGCAGGG
GAGCGAGTCC TTGATCTCTG TTGTGGAGTA GGAGGAAAGA CCACTCACCT GGCAGAATAT
ATGAATAACC AGGGAGAAGT GCTGGCGGTC GAGTTTTATG CGCAAAAGCT GGAACTATTG
CGGCAGAACT GCCAGCGTTT GGGCTTAGGT ATCGTAAAGG ACCTGGAAAA GGATATAAGA
ACCCTTAACA GCAAAGAGGT GAAAGCCCGT TACCTGCTGT TGGACGCTCC CTGCTCCGGA
TGGGGAGTTT TAAATAGAAG AGCGGATGCC CGCTGGCGTA AGAATCAGGA GGAAATTAAC
GAACTCACCC AGCTTCAGGC GCAGTTTATT AGTCATGCCG CTACAATGGT AGAAAAACAG
GGTTATTTAC TATATGCCAC CTGTACCATT AACCAGGCGG AAAACGAAGA AATCATAGAA
GGGTTTTTAG AGGAAAATCA GCATTTTGTC CTGGAGGGTT TTTTGTCAAA GCTTTCATTT
TTCCCTCTGG ACAAGCCAGA TAAAGCCAGT GCGAACAGGG GAATGCTGAC CCTGATGCCA
GGCAAATATG GAACTGATGG TATGTTCTAT GCTTTGTTGA GGAGGAAGTA A
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| Protein sequence | MAIKKDKAVN KARIMAAEIV YEVMERGAFA NLALAKALRN SDLSAADRHL LTEIVNGTVR
MIKHLDWVLE LFLHSPIKKQ NPYLLSILRT ALYQLMFLAK VPDYALVNDA VEISRQKMGA
KMAGVSNAVL RNIIRKLDKI KYPDDPVSFY SIYYSHPDWL VKLWLDTLGT QACETLLAYN
NSRSRVVLRC NPLKCSREEL IDKLEEEGVK AQLSPLTPWG IVVEDNPQPI AETASFKKGY
FYIQNEASML AAAILNPPAG ERVLDLCCGV GGKTTHLAEY MNNQGEVLAV EFYAQKLELL
RQNCQRLGLG IVKDLEKDIR TLNSKEVKAR YLLLDAPCSG WGVLNRRADA RWRKNQEEIN
ELTQLQAQFI SHAATMVEKQ GYLLYATCTI NQAENEEIIE GFLEENQHFV LEGFLSKLSF
FPLDKPDKAS ANRGMLTLMP GKYGTDGMFY ALLRRK
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