Gene Swol_1187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1187 
Symbol 
ID4282665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1373647 
End bp1374771 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content43% 
IMG OID638138060 
Productiron(III) ABC transporter, solute-binding protein 
Protein accessionYP_753867 
Protein GI114566713 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGTGT TAGATAAAAA ATATCCCCGT TTAATATTAT TACTATTAGT TCTTCTGCTG 
TTGGTGATAG GCTACCGTTA TTGGCATGGG CATAATCAAG CAAATAATGA GAATGTACCT
GGTCCTAAAC AGAGTATAAC CGTCATCGAC AACCTGGGGC GTAAGGTGCA GGTGCCTGCC
CATGTTGAAA GGGTCGCCAG TCTTTATGCC TTTTCCGGGC ATGTAACTGC CATGTTAGGA
GAAGGGGATA AGATAGTTGC CATTCCCGAT GGCTTGAAAA AGGATGTATT GCTAAATGTA
ATGTATCCTA AGATAGGTGA TGCTCTAATA CCAGTGGCGG CGGGTTCAAT AAACATTGAA
GAATTACTAA AAACCAATCC TGATGTAGCC TTTATTAAAA ATAGTACTGC TTTAAACCCA
GCGGAAGTGG AAAAACTGGA TACGTTTAAT ATTCCGTACC TGGCCGTAGA TTATAATAGT
ATTGAAGGAC AGCAGCATGC TATTATGGCT ATTGCTCAGG CACTGGGTGT ACCTGAAAAG
GGTCAGGCCT ATATTGATTA CTACCAGGCC AGTATAAAAC GAGTACAGAA GGTAACGGCA
ACTATCCCCG AAAAGGAGCG GGTACGGGTT TACCATGCGG TAAATGAAGC AACGCGTACC
GACACTCCAG ATAGTCTATC GGGTGAATGG ACCAAAATAG CAGGGGCTAT AAATGTATCG
GTATATCATC CTTTACGCCA GTTAGAAGGT AAAAACTACG CCAGTCTGGA GCAGATTCTT
TTATGGGATG CGGATGTAAT TCTGGTAAAT GAACCTGGAG TAGTTGATTA TATAATGACT
AATTCGCAGT GGTCATCCTT AAAAGCGGTT AAAAACAATA GAGTTTACCA GATGCCTATA
GGTATATCCC GCTGGGGGCA TCCGGGCGGA CTGGAAACCC CGCTGGTCAT TATGTGGACG
GCGAAGCAGC TCTATCCTGA ACATTTTGAG GATTTAGATA TAAGAGAAGA GGCCCGCTGT
TTTTATCAGA CCTTCTTTAA CTATCAGGTA TCAGATGAAA TGCTGACTAA TATTTTAAAC
GGTGAAGGTA TGCGAGGGCA CAGTAGGGCA TTTCTAACAA TTTAA
 
Protein sequence
MPVLDKKYPR LILLLLVLLL LVIGYRYWHG HNQANNENVP GPKQSITVID NLGRKVQVPA 
HVERVASLYA FSGHVTAMLG EGDKIVAIPD GLKKDVLLNV MYPKIGDALI PVAAGSINIE
ELLKTNPDVA FIKNSTALNP AEVEKLDTFN IPYLAVDYNS IEGQQHAIMA IAQALGVPEK
GQAYIDYYQA SIKRVQKVTA TIPEKERVRV YHAVNEATRT DTPDSLSGEW TKIAGAINVS
VYHPLRQLEG KNYASLEQIL LWDADVILVN EPGVVDYIMT NSQWSSLKAV KNNRVYQMPI
GISRWGHPGG LETPLVIMWT AKQLYPEHFE DLDIREEARC FYQTFFNYQV SDEMLTNILN
GEGMRGHSRA FLTI