Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1116 |
Symbol | |
ID | 4282952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 1285694 |
End bp | 1287733 |
Gene Length | 2040 bp |
Protein Length | 679 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638137988 |
Product | GTPase subunit of restriction endonuclease-like protein |
Protein accession | YP_753797 |
Protein GI | 114566643 |
COG category | [V] Defense mechanisms |
COG ID | [COG1401] GTPase subunit of restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATTAAGG ATGTACCAGT AGAGGCTATC CTAGATGCTA TGTGGCAATT TGATGAAGAA TACCGCAGCA ATGCAGAATG GTTAAATTGG CAAGATAACA AGAATCACAA ATATGCAATA CAAAGAAATG ATCAGCTCTA TCCCGTAAAA CAGATAATTT CTATGGCAAC CGGGGATCCG GTGAGCTCAT TCAGCGGCGG GGATGAGGCT AATAATTATC TGATAAAAAA GGGTTTTAAA ATAATAACAC TTGCTGATGA ACGAGAAAGT GAAGCAGTTA GGGGATTAGC TGAAAACTTG GCCATTATTT TAAAAGACTA TGTATCTGCT CGTTTAGGCC AGCCATTTAG TTCAAACCAC CAAATATGGC AGGTATTTAA GGATATAGAA GAAAAAATTA ATGATAATGG GAATATATCA AATAATGTTA CGCCACGGTG GAGTGTAGGG CAGGGAAACT GGGCCAAAGT ACCCTGGATA GCGTTTATGG ATAAAAACAA AGCAGATTCG ATTCAGAAGG GTATTTATGT TGCTTATTTA TTTTGTCAGG ATATGCAGGG ATTATATTTA TGTCTGATGC AAGGGGTAAC CGAAATTATC CAAACAGTGG GGCGGAGACA AGGTTATCAG CAATTGCAAC AGAAAGCAGA AGAAATACGC CCCTCCTTGA AGAAATTAGA GGCAAAAGGT TTTAAATTAG ATAATAACAT GAAATTATAT GCTGATAGTA GCTTGGGAAG TGATTATCAA AAAGCAACTA TTGCTTACAA ATTCTATCCG GCTGAAACAT TACCTAATGA CATTGAACTT ACTCGGGATT TGGTTACTAT ACTTAATGCT TATCTTCATG TCGAAGAGCC AAAATCCGGC TTGATTGTTA TCGGTGAGGG GAATGATAGA GTGGAAAGAC TGCTTATGAA CATTGCTGCC CAGGGCTATA CCTTCGAACC GTGGCAAATA GCTGCGTATG TTGCTGCGTT GCGTACGAAA CCATTTGTAA TTCTGGCGGG GGTTTCCGGT ACGGGAAAAT CAAAACTGCC GGCCTTAATC AGTAAGGCAA CCGGTGGAAA TTGCCATCTG ATTCCGGTAA GACCTGATTG GACTGATAGT TCGGATGTGC TTGGCTATTG TGATTTGCAG GGGCAGTTTA AACCAGGTGC TTTGCTGTCA ATAGTTCAGG AGGCCGCAAA AAATCCCGAT AAACATTTTA TCTGCATTTT GGATGAAATG AATCTGGCCC GCGTGGAACA CTACTTTGCC GAGGTTTTAA GCCAGGTGGA AAACCGCCAC CCTGATGGTA CCGGGGGATT TATCAGCGGG CCACTTATCT CTCAGGATTT TAAAGAGGAA GATGCCCAAT GGAGGCAGCA AGTATTGCCA TCTAACCTGG CTATCGTAGG GACTGTTAAT ATGGATGAAA GTGCTTATGG ATTCAGCCGT AAGGTACTGG ATCGCGCTTT TACCCTGGAG TTTTCCGAGA TACATTTAGA ATCCTGGGGA AATGATAGTA CTAAGACTCC TGATATTAAT ATTTGGCCGG TCGAACTCTG GTTTCCCCGG GCCATTAATC TGAACGGGCT ACAGAAGATT ACTGTAGAAG ACAAGCAGAA GATAGAAGAA GTTATCGCGG TGCTCACCGA AGTTAACAGC GTATTGATTC AGGCCCAGTT ACAAGTAGGC TACCGGGTAA GGGATGAAGT AGCCTTATTT GTATTACATG CAGAAGAAAT TATAAGCTCA TTCGTTAACC GGGATGGGAT ACAGGTTAAT CCCCTGGATT TAGCCTTACA GATGAAAATA TTACCCCGGA TTATCGGGGG CAGCACCCCG GTTCGCAAGG TGGTGTTGCA GCTATTGGGT TGGGCAGTTA AAGGGGCAAA TAATATTAGC GAAGAAAATG CGCGGATAAT GGTTGATGAT TGGGATAAAA TGGGGCGACC TACCTTCCTG GCAGATGCCC GCTATCCCCG CACTGCGGCA AGACTATGCC TGATGTGGGA ACGTTTAGTT ACTGAAGGAT TTACATCTTA CTGGATGTGA
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Protein sequence | MIKDVPVEAI LDAMWQFDEE YRSNAEWLNW QDNKNHKYAI QRNDQLYPVK QIISMATGDP VSSFSGGDEA NNYLIKKGFK IITLADERES EAVRGLAENL AIILKDYVSA RLGQPFSSNH QIWQVFKDIE EKINDNGNIS NNVTPRWSVG QGNWAKVPWI AFMDKNKADS IQKGIYVAYL FCQDMQGLYL CLMQGVTEII QTVGRRQGYQ QLQQKAEEIR PSLKKLEAKG FKLDNNMKLY ADSSLGSDYQ KATIAYKFYP AETLPNDIEL TRDLVTILNA YLHVEEPKSG LIVIGEGNDR VERLLMNIAA QGYTFEPWQI AAYVAALRTK PFVILAGVSG TGKSKLPALI SKATGGNCHL IPVRPDWTDS SDVLGYCDLQ GQFKPGALLS IVQEAAKNPD KHFICILDEM NLARVEHYFA EVLSQVENRH PDGTGGFISG PLISQDFKEE DAQWRQQVLP SNLAIVGTVN MDESAYGFSR KVLDRAFTLE FSEIHLESWG NDSTKTPDIN IWPVELWFPR AINLNGLQKI TVEDKQKIEE VIAVLTEVNS VLIQAQLQVG YRVRDEVALF VLHAEEIISS FVNRDGIQVN PLDLALQMKI LPRIIGGSTP VRKVVLQLLG WAVKGANNIS EENARIMVDD WDKMGRPTFL ADARYPRTAA RLCLMWERLV TEGFTSYWM
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