| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0999 |
|---|
| Symbol | |
|---|
| ID | 4283705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 1135043 |
|---|
| End bp | 1137082 |
|---|
| Gene Length | 2040 bp |
|---|
| Protein Length | 679 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638137872 |
|---|
| Product | ATP-dependent protease La |
|---|
| Protein accession | YP_753684 |
|---|
| Protein GI | 114566530 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4930] Predicted ATP-dependent Lon-type protease |
|---|
| TIGRFAM ID | [TIGR02653] conserved hypothetical protein
[TIGR02688] conserved hypothetical protein TIGR02688 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.48984 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGATA ATTTGGACAA AAAGGCTTTA GAACATTTTC GGGGATATGT AGTAAGAAAA
GATTTGGCTC CTTTAATAAA GGGCGGTGCC AATGTGCCTA CTTTCGTACT GGAATATTTG
CTGGCCAATA CCTGCAGTAC GGAAGATGAG CAAAAAATAA ATGTGGGCAT GGAGAATGTT
AAAAGTATTC TGCGCGACCA TTATGTAATC CCTGAAGAAA GCAGTTTAAT TCAATCCAAG
CTGAGGGAAA AAGGACGCTA TAAAATTATT GATAAAGTAT CGGTTGATCT TGACCCGCAG
CGCGATCGCT ACTGGGCCAA TATCAGTAAC AGCAATATAA AAAGGGCTAA TATATCTGAT
GAGCTGGTTA AGAAACATGA AAAAATGTTA TTAGGTGGCA TTTGGGCCAT TATCGACATG
GAATATGACC CCATGATAAG CATTGGCTCA AGCGTTTATC CTTTTGTGGT AAAAGATATT
AACCCTATCC AATTATCTAG CTATGATGCC GGTAAGCTGG CCGCCAAAAG AAAAGAGTTT
AGCAAAGATG AATGGATGAC CCTGCTTTTA AGAAGTGCGG GCTATGAACC GGGCAGTGAA
GGCCTGGATG ACAGGAAGCA GAGCCTTTTG CTGATGAGAT TGATACCACT GGTGGAAGCC
AACTTTAATA TGGTGGAATT GGGACCCCGT TCTTCCGGTA AATCCTATAT CTATAAAGAG
ATAACTCCTT ATGCTCTGCT GATTTCCGGT GGCCAGGGGA CAGTAGCCCA GCTCTTTGTT
AACAACACTA CCGGACGAGT TGGCTCAGTA GGGGAGTGGG ATGCTATCTG TTTTGACGAA
AGCACCGACA AATTATTTAA AGATAGAGAT GCCGTTCCCT TGATGAAAGA TTATATGGAA
TCGGGCTCAT TTTCCCGCGG CGGTAAGACC GGTGAAATTG CTGGCCATGC CTCGGTTATT
TATAATGGCA ATATCAATCA GCCGGTTGAA ACCGTTTTGC AAACTTCCCA TTTGTTTAGC
CCGTTATCGG ATGAGGTTAA TCACGATACT GCGTTTTTGG ACAGGATTAA TCTGTACCTG
CCCGGTTGGG AAATAAGCAA ATTCAGCCCG GATAATTTTA CCCGCCACTA CGGTTTCAGT
ACCGATTTCT TTTCCGAGAT TCTCAAAGCT CAGCGTAAAA CTACCTATTA TGAAGTAATA
GATAAGTATT TTTCCCTGGG ACATCACTTA AAACAGAGAG ATTCCAAGTC AGTTCGTAAA
ACCATTTCCG GTTTTATTAA ACTATTACAT CCTGACGGCA ATTTTACTAA AGAGGATATC
CGGGAATATC TAGTGGTAGC CCTGGAAATG AGAAGACGGG TTAAGGAACA GTTGAAACGC
ATCGGTGGCA TGGAATTCTG GGATACCAAT TTTTCATACA TAGATAAGGA AACTCAGGAA
GAGTTCTTCG TCACTTTGCC TGAGGAACGG GGGAGCGACC TAATTGAAAG AAATCCCTTG
CCCCCGGGAG TTTGCTACAC TGCTACCAGT GACGGGAATA CCAACGCACT GGTTAAAATT
GAAGTGGTGG CTGTGAAAGG CAGTGGCAAG CTAAATATTA CCGGAACCAA CAATAACCAG
GTTAAGGAAA ACATTAAGAA CACCTACAAT TACTTGCGCG CTAACGAAAA GAATATTCTT
ACTGAGCAGC GCTCCTTGAA AGGCTATGAT TTAAATATCC AGATAAGTAA CCTGTTAGGT
GCCTATATCA GCGAGGGGAT TGGCTCGGCG GTATATGTAG CCATTATTTC CTCTATTTAT
AATAAAAACT TGAAAGCTGG ATTAGCAGTC CTGGGTAACC TCTCTATTGG AGGTGCTATT
GAGCAATCCC TACATTTTGC CGACAAGGTT ACCCTCCTGT CAGACAATGG AGCCAAAACG
GTTTTGGTGC CAATTGGCAA TATAAATGAA TTAACCACAT TACCAGCCAG TGTTTTCGAA
AAAGCTGATG TACCTTTTTA CGGGAATAGC CAGATGTTGT TGCAAAAAGC CGTGGAATAG
|
|---|
| Protein sequence | MIDNLDKKAL EHFRGYVVRK DLAPLIKGGA NVPTFVLEYL LANTCSTEDE QKINVGMENV
KSILRDHYVI PEESSLIQSK LREKGRYKII DKVSVDLDPQ RDRYWANISN SNIKRANISD
ELVKKHEKML LGGIWAIIDM EYDPMISIGS SVYPFVVKDI NPIQLSSYDA GKLAAKRKEF
SKDEWMTLLL RSAGYEPGSE GLDDRKQSLL LMRLIPLVEA NFNMVELGPR SSGKSYIYKE
ITPYALLISG GQGTVAQLFV NNTTGRVGSV GEWDAICFDE STDKLFKDRD AVPLMKDYME
SGSFSRGGKT GEIAGHASVI YNGNINQPVE TVLQTSHLFS PLSDEVNHDT AFLDRINLYL
PGWEISKFSP DNFTRHYGFS TDFFSEILKA QRKTTYYEVI DKYFSLGHHL KQRDSKSVRK
TISGFIKLLH PDGNFTKEDI REYLVVALEM RRRVKEQLKR IGGMEFWDTN FSYIDKETQE
EFFVTLPEER GSDLIERNPL PPGVCYTATS DGNTNALVKI EVVAVKGSGK LNITGTNNNQ
VKENIKNTYN YLRANEKNIL TEQRSLKGYD LNIQISNLLG AYISEGIGSA VYVAIISSIY
NKNLKAGLAV LGNLSIGGAI EQSLHFADKV TLLSDNGAKT VLVPIGNINE LTTLPASVFE
KADVPFYGNS QMLLQKAVE
|
|---|
| |