| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0921 |
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| Symbol | |
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| ID | 4281144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 1040509 |
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| End bp | 1042458 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638137787 |
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| Product | penicillin-binding protein |
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| Protein accession | YP_753608 |
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| Protein GI | 114566454 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGTAAAT TTATCCTTAG CAGCATAATT TTGGCCCTAA TAACTTGCCA TATGGGCTTT
ACATGGTCTT TGCCCCGAAT CGAAGTACCC CAGGCATCAG TGGTATATGA TGTTAATGGT
GAAGCAATAA AGGGACTGGG GGAGCAAAAC CGGATTAATA TTGAGCTGAG TGAAATGCCG
GACTATTTTA TCAAAGCCAT AATCGCGGTG GAAGACAAGA ATTTTTACCA GCACCACGGT
ATTGATATGG CAGGGATTTT TAGGGCCATT TATGTAAATA TCAGGGAGAG AAAGATTGTA
GAAGGCGGAA GTACTATAAC CCAGCAGACT GCCAAGAACC TTTTCTTGAG CAATGAACGC
ACTTTTTTGC GTAAGTTTAA GGAGCTTTTT TATGCTCTGG AATTAGAGCG ACAGTATAGC
AAGGATGAGA TCTTAACCAT GTATTGCAAT ACCATCTACT TCGGCCAGGG AGCCTATGGT
ATCGAAGTGG CCGCCCGCAC CTTTTTTGGT AAAAGCGCCC GGGATTTAAG CTTGGCGGAA
TCGGCTCTTC TGGCCGGTAT TCCCCGCTGG CCCAGCAACT ACGATCCCTA TATCAATCCC
GAAGCAGCAA AAAAGCGTCA GTTGGTCGTG CTGCAACGGA TGCAGGAAGA AGGCTATATT
GATCAAGAAA GCAAAGCCCG AGCCGCGGAA GAGAAGCTCC AATATGAAAA AACCACTTAT
ATTAAAGGGG AAGCCCCCTA TTTCATTGCG CTGGTAAAGG ATTACTTGAG TAAAAAATAT
GGAGAGCAAA TGATATATCA AGGGGGTTTG AAGGTTTATA CCAGCCTGGA TCTATATATG
CAGCGGGCTG CCAACCAGGC TTTGCAGTCA GGCTTAGAGG CCTATGATCC CAATTTACAA
GCGGCTCTGG TAGCAGTGGA TTCCGGTAAC GGAGGGATTC GAGCGCTCAT TGGAGGAAGG
GACTATGCCA GTTCAACCTT CAACCGGGTT TTTTCCAAGC GCCAACCAGG TTCGACCTTC
AAGCCCTTTA TGTATTCACT GGCTCTATAT TCCGGTTTTA CTGCGGCTGA TAAAATAATG
TGTGAAGAAG TGGAGTATGA ATTACCCAAT GGTGATATTT ACCGGCCTAC CGATTATGGG
AAAGAACCCT ATCACTGGCG CGAGTTTACT TTGAAAGAGG CGGTAATGAA ATCGGATAAT
GTGGTTGCGG TTCGGGTAAA CAGTATCTTA GGTCCAACAG CTGCCGCCAG CTACGCGGAA
AAATTTGGTT TCAGTAATAT TCAGCCGGTG CTTTCTCTGC CTTTGGGTGC CAGTGAGGTC
AGACCCATAG ATATGGCTTT GGCCTATGCG GTTTTTGCCA ACCGCGGCCT ATACAGTAAT
GCCAACTACA TATTAAAGGT AACGGATAGA AACGGAAAGG TCTTAGAAGA AAATCGCCCC
CAGCAGAGAA GGGTAATTGG GGAGGATAAT GCCTATATAA TTACCAATAT CCTGGAAGGA
GTACTGGAAG CGGGTGGTAC GGGGGCACAC CTGCGCAACG TTTTCGGAGA TAGGATTGCT
GCGGGGAAAA CGGGAACTAC TGATGAATTC AAGGATGCCT GGTTTGTTGG CTTTACTCCC
CGTATTTCTT GTGCGGTTTG GGTGGGTTAT GACAAAAACC GGGATGTTAA TATTTCCGGT
GGGGTAATTG CCGGGCCGAT CTGGGCTAAT TTTATCGAGG GAGCTTCCCG GAGGCTGGCC
GAAGGTGATT TTTATCGTCC GGATAATATA AGACTGCTCA ATATCTGCCT GGATAGTGGG
CTGGTTGCCA GCGAATCCTG CCCCCGGCAA GTGGAAATGG CTTTTGTAGA GGGGAGCGAG
CCCGAAGATA TATGTTATGA ACACCGTGAA GAAAATGAGG GGAGCCTTGA TGACGGTATC
TTTCCCTGGT GGCAAAGCTG GTCTCCATAA
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| Protein sequence | MRKFILSSII LALITCHMGF TWSLPRIEVP QASVVYDVNG EAIKGLGEQN RINIELSEMP
DYFIKAIIAV EDKNFYQHHG IDMAGIFRAI YVNIRERKIV EGGSTITQQT AKNLFLSNER
TFLRKFKELF YALELERQYS KDEILTMYCN TIYFGQGAYG IEVAARTFFG KSARDLSLAE
SALLAGIPRW PSNYDPYINP EAAKKRQLVV LQRMQEEGYI DQESKARAAE EKLQYEKTTY
IKGEAPYFIA LVKDYLSKKY GEQMIYQGGL KVYTSLDLYM QRAANQALQS GLEAYDPNLQ
AALVAVDSGN GGIRALIGGR DYASSTFNRV FSKRQPGSTF KPFMYSLALY SGFTAADKIM
CEEVEYELPN GDIYRPTDYG KEPYHWREFT LKEAVMKSDN VVAVRVNSIL GPTAAASYAE
KFGFSNIQPV LSLPLGASEV RPIDMALAYA VFANRGLYSN ANYILKVTDR NGKVLEENRP
QQRRVIGEDN AYIITNILEG VLEAGGTGAH LRNVFGDRIA AGKTGTTDEF KDAWFVGFTP
RISCAVWVGY DKNRDVNISG GVIAGPIWAN FIEGASRRLA EGDFYRPDNI RLLNICLDSG
LVASESCPRQ VEMAFVEGSE PEDICYEHRE ENEGSLDDGI FPWWQSWSP
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