| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0890 |
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| Symbol | |
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| ID | 4282057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 1007314 |
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| End bp | 1008345 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638137758 |
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| Product | peptidase M50, putative membrane-associated zinc metallopeptidase |
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| Protein accession | YP_753579 |
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| Protein GI | 114566425 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000919526 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACTA TTCTTATTAC CCTATTGATT ATTGCGGTGC TGATTCTGGC CCATGAATGG
GGTCATTTTG TAGTGGCCCG TCGAATTGGC ATACCGGTTT ACGAGTTTGC CATAGGCTTT
GGCCCCAAAG TATTCTCCTG GAAAAGAAAT GGGGTAATCT ATTCTCTGCG TTTGATTCCT
TTAGGGGGCT TTGTGCGCAT GGCCGGGGAA GAGCCTGGTG ATCCCGAAGA ACCCAATGGT
TTCAGCCATA GGACTCCCCT GGAAAAGATT CGGGTTTCCT TTGCCGGGCC TTTTATGAAC
TTTGTTCTGG CCCTGCTGAT CTTTGTTTTC AGCTATAGTG TGATCGGCCT CCCCCATAGC
TCCAACGAGC CTATAATTGG AACGGTAATC AAGGGGAAAC CGGCGGATTT GGCAGGCATC
AAGGCCGGTG ACAGGATAAT TTCGGCGAAT GGTATTGCTG TAAACAGCTG GGCTGATTTT
AACCAGCAGA CCTCCCGTAG CAGCGGCCAG CCCTTGGAGC TACAGCTGGA GCGAAAGCAG
CAGCGGCTTA GCCTGGAGGT TTCGCCGGTA AAACTTGATT CTTCCGGCAA CATGGGTATT
GGTGTTTTGA ACCGGGTGGT TTATGAGAAA CAGGGGATTT TAAAATCCAT GGAACTGGGC
CTGAAACAAA CCTATGAACT TACTCTTCTG CTCTTTTCCG CTTTGGGAGT TCTAATAAGC
GGCGGTGCCT CCATGGGTGA TTTGGCCGGT CCGGTGGGGA TAACGCGTCT GGTGGGTGAG
TTTGCCCAGG TGGGCATGAT ATTCCTGCTT AACTTTACGG CTTTCTTAAG CATTAACCTG
GGTATTATGA ACCTCTTGCC TATTCCGGCT CTGGACGGCA GTAAAATCGT ATTCGCCGTG
GTGGAGGCCA TACGCAAGAA GCCTCTGGAC CCGGAAAAGG AAGGTTTTCT TAACTGGATA
GGTTTTCTCT TTCTGATTGG TTTAATGATA ATTGTAACTT TTAATGATAT TGTAAGATGG
ATAAGAGGAT AA
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| Protein sequence | MNTILITLLI IAVLILAHEW GHFVVARRIG IPVYEFAIGF GPKVFSWKRN GVIYSLRLIP
LGGFVRMAGE EPGDPEEPNG FSHRTPLEKI RVSFAGPFMN FVLALLIFVF SYSVIGLPHS
SNEPIIGTVI KGKPADLAGI KAGDRIISAN GIAVNSWADF NQQTSRSSGQ PLELQLERKQ
QRLSLEVSPV KLDSSGNMGI GVLNRVVYEK QGILKSMELG LKQTYELTLL LFSALGVLIS
GGASMGDLAG PVGITRLVGE FAQVGMIFLL NFTAFLSINL GIMNLLPIPA LDGSKIVFAV
VEAIRKKPLD PEKEGFLNWI GFLFLIGLMI IVTFNDIVRW IRG
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