| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0840 |
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| Symbol | |
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| ID | 4281953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 959931 |
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| End bp | 962015 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638137709 |
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| Product | DNA topoisomerase |
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| Protein accession | YP_753530 |
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| Protein GI | 114566376 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000150599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCAGGAA CTACACTGCT TATTGTAGAG TCAGCGGCCA AAGCCAGAAC CTTAGGGAAA
TTTCTGGGCA AGGGCTATAA AATAAAAGCA TCGGTGGGGC ATGTTCGCGA CTTGCCCAAG
AGCAAATTGG GAGTCGATGT GGAGAATGAT TTTGAACCCC AGTATATTAC TATTCGGGGC
AAAGGAGATA TCCTGAAAGA GATTAAGGAC GAATCCCAAA AAGCCGGTCG CGTTTTACTA
GCTACCGACC CCGATCGTGA AGGAGAAGCT ATAGCCTGGC ATTTGCAGAA TGCTATGAAA
ATTCCGCCGG AGGAGAATTG CCGGATTGAA TTCCATGAGA TTACCCGTGA GGCGGTAAAG
AAGGCCATTA AAAATTCGCG CCCGGTGGAT TTAAGCCGGG TGAATGCCCA GCAGGCCCGC
CGGGTTTTGG ACCGCCTGGT AGGCTACAAC CTGAGCCCTT TGCTTTGGAA TAAGATTCGC
AAGGGCCTGA GTGCGGGCAG GGTGCAATCA GTGGCTTTAA AGTTAATCTG TGATCGGGAA
GAGGAAATAA AGAACTTCAT TCCCCAGGAA TATTGGACCG TAGATGCCAT TTTTAATGCT
GCTAAGGGCA AGAATAGCAA ATTTACTGCT CGTCTGGCCA GCTACCAGGG GAAGAAAATC
GAAATCAACA GTGATAAAGA GGTGGCAGCT ATAGGAGAAT ACCTTCAAGG CGCCAATTTT
ACTGTGCTCA AAGTGGAAAG AAAGGAAAAA CGCAAGAACC CCAACCCCCC GTTTATTACC
AGTACTTTAC AGCAGGAAGC TTCCCGGAGG CTTAATTTCT TCTCCAACCG TACTATGCGG
GTAGCCCAAG AATTATATGA AGGTTTGGAA ATTGGTAAAG AGGGTACGGT AGGATTAATT
ACCTATCTCA GAACTGATTC TACCCGGGTG GCCAGCTCGG CGCAAATGGA AGCCCTGGAC
TTTATTAATT CTACCTTTGG AGCGGAATTT GCTCCGGACA AACCCAATGA ATATAAGAGT
AGGAAATCAG CTCAGGATGC CCATGAAGCT ATTCGCCCAA CTTCCATCCA GCGGACTCCG
GAGAGTGTAA AAGCGTTTTT AAGCCGGGAT CAGTATCGCT TATATCAATT AATATGGAAC
CGCTTTGTTT CCAGTCAAAT GACCCCTGCG GTTTATGATA GTTTGACTGT GGATATCTCG
GCTGGAGACT ACGGTTTCAG AGCCAGTTCA TCACAGCTTA AATTTATTGG CTACAAAAAA
GTCTACAGCG ATAATGAAGA AGAAGAGCCA AAGAATAATA TTCCAGAGCT TAAAAAGGGA
GAAGAACTTG CACTGCATGA GTTAAAGCCG GAGCAGCACT TTACGCAACC TCCACCCCGC
TTTAGTGAGG CCAGTCTAAT TAAATTGCTG GAAGAAAAAA GTGTTGGCCG TCCCAGTACT
TATGCTCCTA CCATAGATAC CATTTTAAAG CGTAATTATG TGGAAAGGCA GAACCGGCAG
TTTATTCCCA CAGAATTGGG CTTTATTGTA GTGGATTTAC TCAAGGAGCA TTTCGCCAAT
ATTCTGGATG TGGAATTTAC CGCCCGGATG GAAGGCGAAT TGGATTTGGT AGAGGAAGGC
AAACTGGATT GGAAAAAGGT GGTACGCGAT TTTTATGAGC CGTTTCACTC TGACCTGGAG
AAGGCCCGTG AGCTGGCCCA GAAGATTGAG ATCAAGGATG AAGAGGCTGG TAAAGAATGC
CCGCAATGTG GAAGACCGAT GCTTATAAAA CACGGTCGAT TTGGTAAATT CATGGCTTGC
TCGGGTTTTC CCGAATGTCG CCATACTCAA TCAATAAATC AGGAATTGGG ACTAAAATGC
CCGCTTTGCC AGGGCTCTAT AGTGGCTTTG AAAAGCAAGA AAGGCCGGAC TTTTTATGGC
TGCAGCAATT ATCCTCAGTG TAACTTCCGC TCCTGGGATA AACCAACGGG GAAAATTTGT
CCCCATTGTG GAGACGCGAT AGTAGAAAAG TTCAATAAAA AGAAAGAAGC TACACAGATT
TGCCAGAATC CCGCTTGCAA GCAGAAGGTG GAAATGGGGG GTTGA
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| Protein sequence | MAGTTLLIVE SAAKARTLGK FLGKGYKIKA SVGHVRDLPK SKLGVDVEND FEPQYITIRG
KGDILKEIKD ESQKAGRVLL ATDPDREGEA IAWHLQNAMK IPPEENCRIE FHEITREAVK
KAIKNSRPVD LSRVNAQQAR RVLDRLVGYN LSPLLWNKIR KGLSAGRVQS VALKLICDRE
EEIKNFIPQE YWTVDAIFNA AKGKNSKFTA RLASYQGKKI EINSDKEVAA IGEYLQGANF
TVLKVERKEK RKNPNPPFIT STLQQEASRR LNFFSNRTMR VAQELYEGLE IGKEGTVGLI
TYLRTDSTRV ASSAQMEALD FINSTFGAEF APDKPNEYKS RKSAQDAHEA IRPTSIQRTP
ESVKAFLSRD QYRLYQLIWN RFVSSQMTPA VYDSLTVDIS AGDYGFRASS SQLKFIGYKK
VYSDNEEEEP KNNIPELKKG EELALHELKP EQHFTQPPPR FSEASLIKLL EEKSVGRPST
YAPTIDTILK RNYVERQNRQ FIPTELGFIV VDLLKEHFAN ILDVEFTARM EGELDLVEEG
KLDWKKVVRD FYEPFHSDLE KARELAQKIE IKDEEAGKEC PQCGRPMLIK HGRFGKFMAC
SGFPECRHTQ SINQELGLKC PLCQGSIVAL KSKKGRTFYG CSNYPQCNFR SWDKPTGKIC
PHCGDAIVEK FNKKKEATQI CQNPACKQKV EMGG
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