| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0827 |
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| Symbol | |
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| ID | 4281922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 945618 |
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| End bp | 947015 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638137697 |
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| Product | UDP-N-acetylmuramate--alanine ligase |
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| Protein accession | YP_753518 |
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| Protein GI | 114566364 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
[TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.164392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTTCA CTCCAGGAAA ATGGATTCAT ATGGTAGGAA TTGCTGGAGC AGGAATGAGT
GGTATAGCCA GGGTACTTGC CCAACAGGGT TATAAGGTCA GTGGTTCGGA CCTGCAGGTC
AACGATACTA CCAGTAGGCT TGAAGAAATA GGTGTCGAGA TATTTAAGGG TCATTCTTCA
TCCAATCTTA AGGAAGGGGT GGATTTGCTG GTCACATCCT CAGCCGTACC TCAAGATAAT
ATTGAGCTAA GGCTGGCCAG GGAGAAAAAG ATTCCTATAT TAAAACGGGG ACAGATGCTG
GCCCATTTGG CCAATGCCAA AAAGGCCGTG GCAGTTGCCG GGGCTCATGG AAAGACCACC
ACAACATCCA TGTTGTACAT GGTATTGGCC AATTGCGGAA CTGAACCTTC GTTTATTGTA
GGGGGAGAGT TGCAGGGAAG CGAGCTGAAC GCCAAACTGG GAAGAGGAGA TTATTTTGTA
GTGGAAGCCG ATGAAAGTGA TGCTTCGTTT CTTGATTTGA GACCATATAT TGCCTTAATA
ACCAATGTTG AAGATGATCA CCTGGATTAT TATAAGTCAG TAGATAATAT AAGAAAAGCT
TTTCGCCAGT TTGTTGAGCA GATTAGACCG GAAGGCTTTG CCATGCTCTA TGGAGGAGAT
GCTTTTAATC GTAGTTTAGT AAAAGATTTA ACGCTAAACA AACGCTTGTT GTTTTATGGA
GAAGACTTAT CTAACGACTA TTATTTTCTG AATTGGGAGT CTATTGGTTT AGGTTCGCAT
TTTGATGTTT ATAAGCGGGA ACTGGGGTTC CTGGGTCGTT TTGAACTAGC GGTTCCGGGA
AAACACAATG CTTTAAATGC TTTAGCAGCC ATAGCCAGTG CTCTGGAGCT GGGACTAGAA
ATGGAGCCAA TAAAATCAGC TTTAAAAAAT TTCCACGGAG CCAGGCGCAG GTTTCAAATC
CAGGGACAGA AAGCTTTGGT TACGGTAGTA GATGACTATG CTCATCACCC CACTGAAATC
CGGGCGACAA TTGATGCGGC CAGGAACTTC CACTCTGGAA GGGTAATTGT GGTATATCAA
CCTCATCGCT ATTCGCGAAC CCAATTGTTG GGTCGTCAAT TGGGTGAGGC CTTAATAAAT
GCTGATCTAG CGATAATCAC TGAGGTTTAT TCTGCTGGGG AAGAAGCTAT TCCTGGGATT
AGCGGGGAAG TGGTTTGCCA GGCCGCCCAA AGTATTGGCT GCCACTCAGT ATATATCCCC
CAGAGAGAAG AGATTATTCC TTACCTGCTT CAAATATGCC AGGAGAATGA TTTGATTATT
ACCATGGGGG CTGGTGACAT ATGGAAACTG GGCCTGCAAT TGCTTGAGGT TCTGCCCGAG
TCTGTTCTGA AGGTTTAG
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| Protein sequence | MAFTPGKWIH MVGIAGAGMS GIARVLAQQG YKVSGSDLQV NDTTSRLEEI GVEIFKGHSS
SNLKEGVDLL VTSSAVPQDN IELRLAREKK IPILKRGQML AHLANAKKAV AVAGAHGKTT
TTSMLYMVLA NCGTEPSFIV GGELQGSELN AKLGRGDYFV VEADESDASF LDLRPYIALI
TNVEDDHLDY YKSVDNIRKA FRQFVEQIRP EGFAMLYGGD AFNRSLVKDL TLNKRLLFYG
EDLSNDYYFL NWESIGLGSH FDVYKRELGF LGRFELAVPG KHNALNALAA IASALELGLE
MEPIKSALKN FHGARRRFQI QGQKALVTVV DDYAHHPTEI RATIDAARNF HSGRVIVVYQ
PHRYSRTQLL GRQLGEALIN ADLAIITEVY SAGEEAIPGI SGEVVCQAAQ SIGCHSVYIP
QREEIIPYLL QICQENDLII TMGAGDIWKL GLQLLEVLPE SVLKV
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