Gene Swol_0808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0808 
Symbol 
ID4281835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp923040 
End bp923663 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content43% 
IMG OID638137679 
Productbeta-lactamase-like protein 
Protein accessionYP_753500 
Protein GI114566346 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.000000286838 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATTAA AGGGTTTGGA ACTAAGCAGT ATGATGGTCA ACTGCTATAT CGTCGGCTGT 
GAAGAGACTA AAGAGGTGGC GGTCATCGAC CCCGGGGGAA ATGCTCGAGC TATATTGAAT 
CTATTGGAGG AAGATGGACT CAAAACGCAG TATATAATCA ATACTCACGG TCATATTGAC 
CATATCGGAG CCAACCAGGC CATAAAAGAT GCTACTGATG CTAAAATTTT GATTCATGAA 
AATGATGCTA AAATGCTGGT TAATCCGGTT TCCAATTTCT CGTTTATGAT GGGAAGCAAG 
GTTATAAGCC CACCGGCTGA TCAGCTTATC CAGGAAGGAG ATATTATAAA GATTGGCAAT 
ACGGTGGAGT TGGAAGTGAT TCATACTCCG GGGCATAGCC AGGGAGGGGT CTGTCTTAAA 
ATCGGAAACA TTATTTTTGT TGGGGACACC CTGTTCCAGG GTTCCATTGG GCGCACGGAT 
TTCCCGGGAG GCTCTTATAA GCAATTGATT CAAAATATTA AAGAAAAGCT CTTGCGTTAT 
GATGATGATA CTATTTGTTA TCCCGGACAT GGACCGGCAA CGACTATTGG TTTTGAGAGG 
ATGCACAACC CGTTTTTGAC CTAA
 
Protein sequence
MILKGLELSS MMVNCYIVGC EETKEVAVID PGGNARAILN LLEEDGLKTQ YIINTHGHID 
HIGANQAIKD ATDAKILIHE NDAKMLVNPV SNFSFMMGSK VISPPADQLI QEGDIIKIGN 
TVELEVIHTP GHSQGGVCLK IGNIIFVGDT LFQGSIGRTD FPGGSYKQLI QNIKEKLLRY 
DDDTICYPGH GPATTIGFER MHNPFLT