| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0738 |
|---|
| Symbol | |
|---|
| ID | 4282855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 842499 |
|---|
| End bp | 843521 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638137610 |
|---|
| Product | integrase/recombinase |
|---|
| Protein accession | YP_753431 |
|---|
| Protein GI | 114566277 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA CTGATTTTGC AGCGTATCTG AATAAATATT TCACGGACTA TCTTCCGAAT
ACCTGCGGAA GCACTCCCCA GACGATTGAT TCATACAGGC ATTCTTTTAT CCTTTTCCTG
ACATATATGC AGGATGAGTA TCAGATCTCT GCTGATAGGG TGGATATATC TGATCTCACT
TACGAAAATA TAGTTTCTTA TCTAAGCTGG CTTAAGGAAA TCCGGTCAAA CGGCGTATCA
ACAAGGAACC AGCGACAGGC AGCCTTAAAC AGCTTCATCC GCTTCCTTAT GTACGAATTT
CCTGAACATC TACATGAATA TCAAAGGATC CTTGGTATTC CAGTCAAGAA AACGCCGCAA
AAAGAAATTT CTTATCTTAA AACCGAGGGT GTAGCATTAT TAATCAGCCA GGTGGATTTA
AACCGGCAGA ACGGACTTCG GGATTATGTT ATCCTTTCTC TGCTGTATAC AACTGGAATC
CGCGTCAGTG AATTGATACA GATCCGTGTA AAAGATCTTT CACTGCAGGA ACCCTTCACA
CTTTTGGTTC ATGGAAAAGG GCAAAAAAGC AGATATATAC CGCTGATGCG CAGTACAATC
CCTTTTATCC AAAAATATCT TGTTCAAAAA AGGTATGACA GACCGGAGAG GCTGGATGAA
TGGCTGTTTA AAAACCACAT GAGCAAATCA TTCACCAGAC AGGGGATTAA TTATATCGTA
GGAAAATATA CAAAAATGGC ACGAGAAATC GCTCCAGATA TGATTCCTGC CGATTTCAGT
CCGCATAAAA TGAGGCACAC AACTGCCATG GGGTTGGTCG AATCTGGTGT GGATCTGATT
TATATCCGAG ATTTGCTCGG ACATGAAAGC ATAAAAACAA CGGAAGTGTA CGCAAGGGCA
GATGCAATGC ATAAACGTCA GGCCATCGAG GCAGCTAGTA AGGAAATCGT GCCTCCAGAA
GAAGCCGAAT GGGATAAAAA TTCAAACCTG AAAGACTGGC TTAAGAATTT CAACCGAAGA
TAA
|
|---|
| Protein sequence | MKRTDFAAYL NKYFTDYLPN TCGSTPQTID SYRHSFILFL TYMQDEYQIS ADRVDISDLT
YENIVSYLSW LKEIRSNGVS TRNQRQAALN SFIRFLMYEF PEHLHEYQRI LGIPVKKTPQ
KEISYLKTEG VALLISQVDL NRQNGLRDYV ILSLLYTTGI RVSELIQIRV KDLSLQEPFT
LLVHGKGQKS RYIPLMRSTI PFIQKYLVQK RYDRPERLDE WLFKNHMSKS FTRQGINYIV
GKYTKMAREI APDMIPADFS PHKMRHTTAM GLVESGVDLI YIRDLLGHES IKTTEVYARA
DAMHKRQAIE AASKEIVPPE EAEWDKNSNL KDWLKNFNRR
|
|---|
| |