| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0681 |
|---|
| Symbol | |
|---|
| ID | 4283618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 781677 |
|---|
| End bp | 782528 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638137558 |
|---|
| Product | sec-independent protein translocase protein TatC |
|---|
| Protein accession | YP_753379 |
|---|
| Protein GI | 114566225 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
|---|
| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000821362 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGTTAC TAAAGGATTT AACCCCTGAA GAAAAACAAA CCATAATTGA GCACCTGGAA
GAGCTGCGCA AGTCCTTGAT AATAAGCATT ATTGCTATTA TAGCAGCGGC AGTCTTTTGT
TTTTACTATA ACGAAGAGAT ACTGTCCGTA ATTATTTCCC CCTTGTCTGG TTTAGGCGAA
GGATTGGTAG TAATCGGTGT AACCGAAGCA TTTTTTATAA AGCTTAAACT GGCCTTTTAT
GCGGGCTTTG CTCTGGCCTT TCCGGTGGTA GCCTGGGCTA TCTGGCGTTT TTTCAAGCCT
GCCCTCTATC CCGAAGAGAG AAAATATGTT TATGTACTGC TTCCGGTAAG CGTTCTGCTC
TTTTCCACCG GGATTCTTTT TTCCTATTTT GGCATACTTC CCCTGGTTCT AAAGTTCTTT
ATTTATATGC AGGGACCCAG TCTGGAAAAC ATGTTTACTG TGGAACGCTA TGTTTCCTTT
GTAACCGCCT TTACCATTCC CTTTGGCCTG GTCTTTGAGC TGCCGGTGGT AGTATTTTTC
CTGGCCAAAT TCGGAATTAT TAAAGCCGAA ACTTTAAGCA AAAACAGAAA GTATGCCCTT
TTAGCCATAG TAGTAATTGC CGCCGCCCTT ACCCCCGGAC CGGACCCCAT CTCCCAGATG
CTGATGGCCG GACCCGTATA CTTTTTATAT GAAGTAAGCA TAATCGTGGC TAAAATGGCC
AAACCGAGGA AAAAAACCGA AGAGGAAGAG AGTGAAGAAC CCCGAGAGCC CGAACCAGAA
AGGGAAGAAC AGCCCAGAAA GCCTGAAGAG GAGAAAGAAG GCGAGGAGCA AGCTACAGTA
GATGAAAGCT AG
|
|---|
| Protein sequence | MALLKDLTPE EKQTIIEHLE ELRKSLIISI IAIIAAAVFC FYYNEEILSV IISPLSGLGE
GLVVIGVTEA FFIKLKLAFY AGFALAFPVV AWAIWRFFKP ALYPEERKYV YVLLPVSVLL
FSTGILFSYF GILPLVLKFF IYMQGPSLEN MFTVERYVSF VTAFTIPFGL VFELPVVVFF
LAKFGIIKAE TLSKNRKYAL LAIVVIAAAL TPGPDPISQM LMAGPVYFLY EVSIIVAKMA
KPRKKTEEEE SEEPREPEPE REEQPRKPEE EKEGEEQATV DES
|
|---|
| |