| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0659 |
|---|
| Symbol | |
|---|
| ID | 4281604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 755651 |
|---|
| End bp | 756625 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638137536 |
|---|
| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_753357 |
|---|
| Protein GI | 114566203 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA CTAAGCTGGC ATTGCTGGTG ATACTGGGCT TATTGTTATT ATTGCCAGGT
TGTAATGATA AGAAAGCTTC CCCGAGCATA GCCGAAGTAA ACAGCGAAAT AATTACCCAG
GAGCAATATG ATAAAGCCTG CCAGAACCTT AAACAGGCAT ACGAAGTTCA GAATCCCGCC
CAGTCCGGAG ACAAAGCCGA CAGCAGCGGC AAAATCGACT CAGAGATGGA GAAACGATTA
CAGGATCAAG CCTTTGATAG TCTGGTTATG CAGGCTCTGC TGCGACAAGA TGCCGAAAAA
CGAGGTATAA AGATTAAGGA AAAAGAAATT GATGTAGCTA TTGATAGCTT TAAAGCCAAC
CTGGCGGCAG AAGGAAAAGA TGCTTACCAG AAGTTTTTAC AGGAAAACAA TCTCAATGAA
AAAGAACTCC GTGAGGAAGC CCGGATGCAG TTGCTGGTCA ATCAACTCCA AAAAAAGATA
AACGCTTCAA TTACCATAGA GGAAGAGGAA CTACAGCAAT ACTACCAGGA AAATATAGCC
AGCTTCCAGG AAGCAGCCGG CATGCAGATA TCCCATATAC TGGTAGCAAC GGATAAGGAA
GCGAGAGAAT TGTTAACCCA ATTGCAGCAA GGAGCCGACT TTGCCCAGCT GGCCCAGGAA
CATTCCAGTT GTGCCAGCAA GGCCCAGGGG GGTTATCTCG GAGTTGTGAA CGAGAACAGT
AATTATGTGC CCGAATTCAA AAACGCGGCT TTACAACTCA AAGCCGGAGA AATTACCCAG
GAGCCGGTAA AAAGCGATTT CGGCTACCAC ATTATTAAGG CCGGTCAGCT CCAACCAACC
ACTACCAAAT CTTTTGACGA AGTAAAAAAC CAGATACGGA TGCAGTTGGA AAAAGAAAAG
GAAAATACTC TTTTCAGCCA GTATATGGAG GACTTGCGCC AGCAGGCTCA GATTAAAGAC
CATCGCAAGT CATAG
|
|---|
| Protein sequence | MKKTKLALLV ILGLLLLLPG CNDKKASPSI AEVNSEIITQ EQYDKACQNL KQAYEVQNPA
QSGDKADSSG KIDSEMEKRL QDQAFDSLVM QALLRQDAEK RGIKIKEKEI DVAIDSFKAN
LAAEGKDAYQ KFLQENNLNE KELREEARMQ LLVNQLQKKI NASITIEEEE LQQYYQENIA
SFQEAAGMQI SHILVATDKE ARELLTQLQQ GADFAQLAQE HSSCASKAQG GYLGVVNENS
NYVPEFKNAA LQLKAGEITQ EPVKSDFGYH IIKAGQLQPT TTKSFDEVKN QIRMQLEKEK
ENTLFSQYME DLRQQAQIKD HRKS
|
|---|
| |