Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0558 |
Symbol | |
ID | 4281399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 652052 |
End bp | 653962 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638137442 |
Product | pyruvate carboxylase subunit B |
Protein accession | YP_753263 |
Protein GI | 114566109 |
COG category | [C] Energy production and conversion [I] Lipid transport and metabolism |
COG ID | [COG0511] Biotin carboxyl carrier protein [COG5016] Pyruvate/oxaloacetate carboxyltransferase |
TIGRFAM ID | [TIGR00531] acetyl-CoA carboxylase, biotin carboxyl carrier protein [TIGR01108] oxaloacetate decarboxylase alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0745803 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTGG GCAAAATCAA GATAACTGAT ACCAGTTTGC GAGACGGACA TCAAAGTTTG TGGGCCACCC GTATGACTAC AGAAGATATG CTTCCCATCC TGGAAAACAT TGACGAGGTG GGTTATCATT CCCTGGAAGT ATGGGGAGGC GCTACCTTTG ATGTATGTAT TCGCTACCTT AATGAAGACC CCTGGGAAAG GTTGCGTAAA ATCCGCCGCG GAATAAAAAA GACCAAATTG CAAATGCTGC TCAGAGGTCA ATCAATTGTA GGTTATACCC ATTATCCGGA TGACATTGTC GAGAAGTTTG TGGAAAAGGC GGCGGAGAAT GGTATTGACA TATTCCGCGT ATTTGATGCC TTAAACGATA TCCGGAATCT GGAAACCTGC ATGAGGGCCG CCAAAAAAAG CGGCAAACAT GTGCAGGCCT GTGTAGTCTA TACTGTAAGC CCGGTTCATA CCATGCAGCA TTTTGTAGAG ACGGCTCTGC GGCTGAAGGA TATGGGGGCG GATTCCATAT GTATTAAGGA TATGGCCGGT TTATTATCGC CTTATGCCTC CTTTGAGCTG GTTAAGGCCC TAAAGGATAA TGTCCAGCTG CCCCTGCAAT TGCATACTCA CTATATAGGT GGACTGGCTA TTGCGGCTCT TTTAAAAGCA GCGGAAGCCG GGGTGGATAT CATTGATACC GCCAGCGTAC CTATGGCCTT TGGTTCTTCC CAACCGCCGG TGGAGACCAT TGTGAGAGCC CTGCAGGATA CTCCCTGGGA TACCGGCTTA GATCTTCATG CCTTGTTTAA TATTGCTACT CATTTTGAGC AGATACGCAA ACACAAGGGC TTTGAGCGGG GAGTAACGCG TATTGCCGAT ATGAAAGTTT TTGAACACCA GGTGCCTGGA GGCATGATTA CCAACCTCTA CTCGCAATTG GAAGAACAGA AGGCTTCCCA CCGCATTGAC GAGGTGCTGG CGGAAATACC AAGGGTGAGA GCAGATTTGG GCTATCCCCC GTTGGTTACG CCTACCAGCC AGATAATTGG GATTCAAGCG GTGCTGAATA TATTAATGGG AGAAAGATAT AAGCTCTGCC CCGGTGAGGT AAAGGACTAT GTCCGGGGCT ATTACGGTAA ACCGGCGGTA GCAATTAAGG ACGAGATCCG GAAAAAGATA ATTGGCGACG AAGAGGTCAT TACCGTCCGG CCTGCTGATT TGCTGGAGCC GGCCTGGGAG AGATCTCGCC AGGAGCTGGG TGAACTGGCG GAGAGTGAGG AGGATATACT TACTTATGCT TTGTTCCCCC AAGTTGCCTT AAAATTTTTC GAATATAGAA AAAACAGGGG GGCCGAAGAT ATTCCCCAGA TTTCTTCCAT AGATACTCTG GGGGAAGAAC TGCTTGATGA AGAAGCCCCG GTAGCAATAC CGCCGGTGGT TTCGCGAGTT AAGAAGGTTG CAGCTCATGG GGGAGATGAT GAAATGAAAA TCGATGAAAT TAGAGAATTG ATACTCTTGA TGGACCAGAG CAGTATCAGT GAACTGGAAG TACAAAAAGA CGCTTATAGA CTAAGTTTAC GCAAAGGAAA TGGGCCGGCA ATTGATAAAG CGGCAACTGC TGCACCGATG AATTTGCCCC CGGCCCTCTC CAGTGAAGCA GCTAAGCTTG AGCAGGATAA TTTTACGGAG ATTTTGGCTC CCATGGTGGG GACTTTCTAT GCGGCACCTT CCCCGGATTC CCCTCCCTAT GTGCAGCCGG GAGACCATGT TAGCCCGGGT CAGACCCTGT GCATACTGGA GGCCATGAAG TTGATGAATG AGATAAAAAC CGAATTTGCC GGAACCATTA TTGAAATCAT GGTGGACAAC GCGGAAGCGG TTGAATATGG TCAAGTCCTG TTCTTAATAG AGAAAGACTA G
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Protein sequence | MELGKIKITD TSLRDGHQSL WATRMTTEDM LPILENIDEV GYHSLEVWGG ATFDVCIRYL NEDPWERLRK IRRGIKKTKL QMLLRGQSIV GYTHYPDDIV EKFVEKAAEN GIDIFRVFDA LNDIRNLETC MRAAKKSGKH VQACVVYTVS PVHTMQHFVE TALRLKDMGA DSICIKDMAG LLSPYASFEL VKALKDNVQL PLQLHTHYIG GLAIAALLKA AEAGVDIIDT ASVPMAFGSS QPPVETIVRA LQDTPWDTGL DLHALFNIAT HFEQIRKHKG FERGVTRIAD MKVFEHQVPG GMITNLYSQL EEQKASHRID EVLAEIPRVR ADLGYPPLVT PTSQIIGIQA VLNILMGERY KLCPGEVKDY VRGYYGKPAV AIKDEIRKKI IGDEEVITVR PADLLEPAWE RSRQELGELA ESEEDILTYA LFPQVALKFF EYRKNRGAED IPQISSIDTL GEELLDEEAP VAIPPVVSRV KKVAAHGGDD EMKIDEIREL ILLMDQSSIS ELEVQKDAYR LSLRKGNGPA IDKAATAAPM NLPPALSSEA AKLEQDNFTE ILAPMVGTFY AAPSPDSPPY VQPGDHVSPG QTLCILEAMK LMNEIKTEFA GTIIEIMVDN AEAVEYGQVL FLIEKD
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