Gene Swol_0480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0480 
Symbol 
ID4281391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp563223 
End bp564251 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content41% 
IMG OID638137365 
Producthypothetical protein 
Protein accessionYP_753186 
Protein GI114566032 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03640] CRISPR-associated endonuclease Cas1, DVULG subtype 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.843474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGGCGCT TATTAAATAC TCTATATGTA ACGACACCTG ATTCGTATCT GGCTCGTGAA 
GGGGAAAATA TTCTTATCCG CCTGGAGGAA AAAATTGTTT TCCGTATACC ATCACATAAC 
ATTGAAGCGA TTGTTTATTT TGGTTATCCG GGAGCAAGTC CATCTTTATT GGGTCTCTGT 
GCCGAAAAAG GAATAACGGT AAGCTTTTTC AGTCCAAATG GCAGGTTTTT AGCTCGGGTT 
GAGGGACCGC AAACCGGCAA TGTTTTGTTA CGACGCAAAC AATATCGTAT GGCTGATGAG 
GAAAACCAGG TTCCCGTATT AGCGAAGTAC TTTATTGCGG CAAAAATATT GAATAGTAGA 
GCCGTCCTTC AGAGAGGACG CAGAGATCAT CCAGATAAAG TTGGGGATAG TATTGAGCGA 
AGCATTGCCT TACTTGCTGG TTCAGTTAAA AAGGTATTTG ATAGTGAAAA CCTTAATGAT 
ATACGCGGAT TAGAAGGTGA TGCGGCACAG AGGTATTTTT CAGAAGTGGA CAATCTAATT 
CTTGAACAGA AACAGGATTT TTTTATGGCT GCCAGGAGTA GACGGCCGCC TTTAGACAAT 
GTAAATGCAT TATTATCTTT TTTCTATACA CTATTGGTTC ATGAATGTAG AGCTGCTTTA 
GAAAGTGTAG GGCTTGATCC GGCTGTAGGA TTCTTACATA GAGATAGACC TGGTCGGCCT 
AGTTTAGCAT TGGATTTAAT GGAAGAACTT CGTCCATATT TGGGGGACAG GATGGTTCTT 
TCACTAATTA ATCGCAAGCA GATTAATAAG GACGATTTTA TAACAAAAGA GAATGGAGCC 
GTGTATGTTC TACCTGATAC CAGGAAGATG CTCCTGACGG TCTGGCAAAA GCGTAAACAA 
GAAGAAATTA TCCATCCATA TTTGGAAGAA AAGATTCCGA TAGGATTGTT ACCATATACG 
CAGGCTCTAT TGCTTGCTAG GTTTTTACGG GGTGATTTGG ATGCTTATCC GGCATTCATT 
TGGAAATAG
 
Protein sequence
MRRLLNTLYV TTPDSYLARE GENILIRLEE KIVFRIPSHN IEAIVYFGYP GASPSLLGLC 
AEKGITVSFF SPNGRFLARV EGPQTGNVLL RRKQYRMADE ENQVPVLAKY FIAAKILNSR 
AVLQRGRRDH PDKVGDSIER SIALLAGSVK KVFDSENLND IRGLEGDAAQ RYFSEVDNLI 
LEQKQDFFMA ARSRRPPLDN VNALLSFFYT LLVHECRAAL ESVGLDPAVG FLHRDRPGRP 
SLALDLMEEL RPYLGDRMVL SLINRKQINK DDFITKENGA VYVLPDTRKM LLTVWQKRKQ 
EEIIHPYLEE KIPIGLLPYT QALLLARFLR GDLDAYPAFI WK