| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0454 |
|---|
| Symbol | |
|---|
| ID | 4283484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 534114 |
|---|
| End bp | 534722 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638137339 |
|---|
| Product | HAM1 protein |
|---|
| Protein accession | YP_753160 |
|---|
| Protein GI | 114566006 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAGAG AATTGTTGCT GGCTACCAGA AATCGCAAGA AGAAACTGGA ACTACAGGAG
ATTCTTCGTG AGCTAAATCT GAATATTCTT ACCCTGGAGG AACTACCCTA CCTGGCCGAG
GTAGAGGAAG ACGGTAATTC TTTTGCGGAA AATGCCATAA AAAAAGCGGT ACTTACAGCC
AAGGCCAGCG GGAAAATATG TTTGGCGGAT GATTCGGGAC TGGTAGTTGA TGCCCTGGGG
GGACAGCCGG GGATATATTC GGCGCGCTTT GCCGGTGAAT TGGCCAGTGA TGAAGAGAAC
AACCAGAAGT TGCTTAAGCT GATGGAAATG ATAGAGGAAG ACAAGAGGAC GGCGAGATTC
GTTTGCGTTA TTGCCCTGAG TGATGCTCAG GGAAATGTGG AAACGGTGGA AGGAATATGT
GAAGGGAGAA TAGCTCTGGC GACAGCAGGA AAAGGAGGAT TTGGCTATGA TCCTCTTTTT
ATACCCCAGG GTTATACCCA GAGCTTTGCT GAGCTGCCAT CAGCGACTAA GAACCTTATA
AGTCACCGGG GGAAGGCTTT AGAGCAAGCC CGCCCGCTGA TAGAAAGATT ATTTTTGGGT
AGTACTTGA
|
|---|
| Protein sequence | MPRELLLATR NRKKKLELQE ILRELNLNIL TLEELPYLAE VEEDGNSFAE NAIKKAVLTA
KASGKICLAD DSGLVVDALG GQPGIYSARF AGELASDEEN NQKLLKLMEM IEEDKRTARF
VCVIALSDAQ GNVETVEGIC EGRIALATAG KGGFGYDPLF IPQGYTQSFA ELPSATKNLI
SHRGKALEQA RPLIERLFLG ST
|
|---|
| |